About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 122 123 124 125 126 127 128 129 130 131 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_006795-T1PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE
OS493_006796-T1PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE
OS493_006797-T1UNCHARACTERIZED
OS493_006798-T1CHARGED MULTIVESICULAR BODY PROTEIN
OS493_006800-T1UNCHARACTERIZED
OS493_006801-T1
OS493_006802-T1MULTICOPPER OXIDASE-RELATED
OS493_006803-T1
OS493_006804-T1
OS493_006805-T1
OS493_006806-T126S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3
OS493_006807-T1HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
OS493_006808-T1
OS493_006809-T1UNCHARACTERIZED
OS493_006811-T1ALANYL-TRNA EDITING PROTEIN
OS493_006812-T1
OS493_006813-T1
OS493_006815-T1
OS493_006817-T1TIMEOUT/TIMELESS-2
OS493_006818-T1PENTRAXIN
OS493_006819-T1
OS493_006820-T1POLYGLUTAMINE SYNTHESIS ACCESSORY PROTEIN RV0574C-RELATED
OS493_006821-T1
OS493_006822-T1UNCHARACTERIZED
OS493_006823-T1CADHERIN-87A
OS493_006824-T1CYTOCHROME P450 FAMILY 4
OS493_006825-T1
OS493_006826-T1
OS493_006827-T1INNER MEMBRANE TRANSPORT PROTEIN YAJR
OS493_006828-T1CYTOCHROME P450 FAMILY 4
OS493_006829-T1
OS493_006830-T1
OS493_006831-T1INNER MEMBRANE TRANSPORT PROTEIN YAJR
OS493_006832-T1CARNITINE O-ACYLTRANSFERASE
OS493_006833-T1GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT
OS493_006834-T1TRANSMEMBRANE PROTEIN
OS493_006835-T1TRANSMEMBRANE PROTEIN
OS493_006836-T1TESTIS-EXPRESSED PROTEIN 49
OS493_006837-T1UNCHARACTERIZED
OS493_006838-T1
OS493_006839-T1PRE-MRNA-SPLICING FACTOR CWF18
OS493_006840-T1STI2 PROTEIN-RELATED
OS493_006841-T1STI2 PROTEIN-RELATED
OS493_006842-T1STI2 PROTEIN-RELATED
OS493_006844-T1CRUMBS FAMILY MEMBER
OS493_006845-T1
OS493_006846-T1CRUMBS FAMILY MEMBER
OS493_006847-T1
OS493_006848-T1PROTEIN CBG18546
OS493_006849-T1HEAT SHOCK 70 KDA PROTEIN 14
TOP