About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_006502-T1
OS493_006503-T1
OS493_006504-T1
OS493_006505-T1
OS493_006506-T1
OS493_006507-T1
OS493_006508-T1
OS493_006509-T1INACTIVE POLYGLYCYLASE TTLL10
OS493_006510-T1NLPC_P60 DOMAIN-CONTAINING PROTEIN
OS493_006511-T1CELL DIVISION CYCLE-ASSOCIATED PROTEIN 3
OS493_006512-T1UNCHARACTERIZED
OS493_006513-T1
OS493_006514-T1CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER
OS493_006515-T1CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER
OS493_006516-T1E3 UBIQUITIN-PROTEIN LIGASE MARCH 2/3 FAMILY MEMBER
OS493_006517-T1
OS493_006518-T1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
OS493_006519-T1ELONGATOR COMPLEX PROTEIN 5
OS493_006520-T1UNCHARACTERIZED
OS493_006521-T1NUDIX HYDROLASE
OS493_006522-T1GLUTATHIONE S-TRANSFERASE KAPPA
OS493_006523-T1
OS493_006524-T1PROTEIN AF-9 HOMOLOG
OS493_006525-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_006526-T1BETA-ALANINE-ACTIVATING ENZYME
OS493_006527-T1ALDO/KETO REDUCTASE
OS493_006528-T1
OS493_006529-T1FE2OG DIOXYGENASE DOMAIN-CONTAINING PROTEIN
OS493_006530-T1UNCHARACTERIZED
OS493_006532-T1
OS493_006533-T1G-PROTEIN COUPLED RECEPTOR FAMILY 1 MEMBER
OS493_006534-T1THYROTROPIN-RELEASING HORMONE RECEPTOR
OS493_006535-T1MKRN2 OPPOSITE STRAND PROTEIN
OS493_006536-T1
OS493_006537-T1MITOCHONDRIAL ATPASE COMPLEX SUBUNIT ATP10
OS493_006538-T1TRANSMEMBRANE PROTEIN 107
OS493_006539-T1
OS493_006540-T1
OS493_006541-T1
OS493_006542-T1FIBRILLIN-RELATED
OS493_006543-T1EGF-LIKE DOMAIN-CONTAINING PROTEIN
OS493_006544-T1FIBRILLIN-RELATED
OS493_006545-T1
OS493_006546-T1
OS493_006547-T1PA14 DOMAIN-CONTAINING PROTEIN
OS493_006548-T1
OS493_006549-T1FTP DOMAIN-CONTAINING PROTEIN
OS493_006550-T1FTP DOMAIN-CONTAINING PROTEIN
OS493_006551-T1FIBRILLIN-RELATED
OS493_006552-T1SPERM ASSOCIATED ANTIGEN 7
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