About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_007036-T1
OS493_007037-T1
OS493_007038-T1
OS493_007039-T1
OS493_007040-T1
OS493_007041-T1
OS493_007042-T1
OS493_007043-T1
OS493_007044-T1
OS493_007045-T1SENTRIN-SPECIFIC PROTEASE
OS493_007046-T1EXPRESSED PROTEIN
OS493_007047-T1
OS493_007048-T1
OS493_007050-T1
OS493_007051-T1
OS493_007052-T1SI:CH211-108C17.2-RELATED-RELATED
OS493_007053-T1SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED
OS493_007054-T1
OS493_007055-T1
OS493_007056-T1
OS493_007057-T1
OS493_007058-T1
OS493_007059-T1
OS493_007060-T1
OS493_007062-T1
OS493_007063-T1
OS493_007064-T1
OS493_007065-T1UNCHARACTERIZED
OS493_007066-T1
OS493_007067-T1
OS493_007068-T1
OS493_007069-T1
OS493_007070-T1
OS493_007071-T1ORGANIC ANION TRANSPORTER
OS493_007072-T1ORGANIC ANION TRANSPORTER
OS493_007073-T1ORGANIC ANION TRANSPORTER
OS493_007075-T1PROTEIN CBG12054-RELATED
OS493_007076-T1PROTEIN CBG12054-RELATED
OS493_007077-T1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
OS493_007078-T1ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
OS493_007079-T1
OS493_007081-T1
OS493_007082-T1HYDRANTOINASE/DIHYDROPYRIMIDINASE FAMILY MEMBER
OS493_007083-T1CARBONIC ANHYDRASE
OS493_007084-T1SPRY DOMAIN CONTAINING SOCS BOX PROTEIN
OS493_007085-T1NEURALIZED
OS493_007086-T1ARMADILLO-TYPE FOLD-RELATED
OS493_007087-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_007088-T1
OS493_007089-T1SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED
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