About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_007090-T1SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED
OS493_007094-T1
OS493_007095-T1COLLAGEN ALPHA
OS493_007096-T1PROTEIN-TYROSINE SULFOTRANSFERASE 2
OS493_007097-T1PROTEIN-TYROSINE SULFOTRANSFERASE 2
OS493_007098-T1PROTEIN-TYROSINE SULFOTRANSFERASE 2
OS493_007099-T1
OS493_007100-T1
OS493_007101-T1
OS493_007102-T1TGF-BETA FAMILY
OS493_007103-T1
OS493_007104-T1
OS493_007105-T1PALMITOYLTRANSFERASE
OS493_007106-T1
OS493_007107-T1
OS493_007108-T1
OS493_007109-T1MALE STERILE (3) 76CA
OS493_007110-T1
OS493_007111-T1
OS493_007112-T1
OS493_007113-T1
OS493_007114-T1
OS493_007115-T1
OS493_007116-T1
OS493_007117-T1
OS493_007118-T1
OS493_007119-T1
OS493_007120-T1
OS493_007122-T1OPSIN
OS493_007123-T1GLYCOPROTEIN HORMONE RECEPTOR
OS493_007125-T1
OS493_007126-T1
OS493_007127-T1INTELECTIN
OS493_007128-T1SAM (S-ADENOSYL METHIONINE) TRANSPORTER
OS493_007130-T1
OS493_007131-T126S PROTEASOME NON-ATPASE REGULATORY SUBUNIT
OS493_007133-T1LATROPHILIN RECEPTOR-LIKE PROTEIN A
OS493_007135-T1ARMADILLO-TYPE FOLD-RELATED
OS493_007136-T1
OS493_007137-T1ARMADILLO-TYPE FOLD-RELATED
OS493_007138-T1PROTEIN EVA-1
OS493_007139-T1
OS493_007140-T1FUKUTIN RELATED PROTEIN
OS493_007141-T1
OS493_007142-T1
OS493_007143-T1
OS493_007144-T1
OS493_007145-T1PROTEIN EVA-1
OS493_007146-T1
OS493_007147-T1
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