About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50%31,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8001188.1SERINE/THREONINE-PROTEIN PHOSPHATASE 2B CATALYTIC SUBUNIT 1-RELATED
CAI8001190.1SERINE/THREONINE-PROTEIN PHOSPHATASE 2B CATALYTIC SUBUNIT 1-RELATED
CAI8001196.1SI:DKEY-97L20.6
CAI8001194.1SI:DKEY-97L20.6
CAI8001192.1SI:DKEY-97L20.6
CAI8001198.1
CAI8001202.1
CAI8001200.1
CAI8001204.1
CAI8001206.1
CAI8001208.1
CAI8001210.1
CAI8001212.1
CAI8001214.1
CAI8001216.1
CAI8001218.1
CAI8001220.1
CAI8001222.1
CAI8001232.1SERINE INCORPORATOR
CAI8001228.1SERINE INCORPORATOR
CAI8001230.1SERINE INCORPORATOR
CAI8001226.1SERINE INCORPORATOR
CAI8001224.1SERINE INCORPORATOR
CAI8001234.1SERINE INCORPORATOR
CAI8001236.1
CAI8001238.1
CAI8001240.1
CAI8001242.1SYNAPTIC VESICLE GLYCOPROTEIN 2
CAI8001248.1RASSF
CAI8001254.1RASSF
CAI8001250.1RASSF
CAI8001246.1RASSF
CAI8001244.1RASSF
CAI8001252.1RASSF
CAI8001260.1RASSF
CAI8001258.1RASSF
CAI8001256.1RASSF
CAI8001262.1
CAI8001264.1CYSTEINE-RICH PROTEIN CRIP FAMILY MEMBER
CAI8001269.1ADHESION G-PROTEIN COUPLED RECEPTOR
CAI8001273.1OLIGOPEPTIDE TRANSPORTER-RELATED
CAI8001275.1OLIGOPEPTIDE TRANSPORTER-RELATED
CAI8001271.1OLIGOPEPTIDE TRANSPORTER-RELATED
CAI8001277.1
CAI8001285.1ACTIN
CAI8001283.1ACTIN
CAI8001281.1ACTIN
CAI8001287.1ACTIN
CAI8001289.1ACTIN
CAI8001291.1ACTIN
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