About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_005757-T1
OS493_005758-T1EXPRESSED PROTEIN
OS493_005759-T1EXPRESSED PROTEIN
OS493_005760-T1UNCHARACTERIZED
OS493_005761-T1UNCHARACTERIZED
OS493_005762-T1PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE
OS493_005763-T1PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE
OS493_005764-T1
OS493_005765-T1NITRIC OXIDE SYNTHASE-RELATED
OS493_005766-T1
OS493_005767-T1
OS493_005768-T1
OS493_005769-T1UNCHARACTERIZED
OS493_005770-T1UNCHARACTERIZED
OS493_005771-T1UNCHARACTERIZED
OS493_005772-T1UNCHARACTERIZED
OS493_005774-T1
OS493_005775-T1
OS493_005776-T1
OS493_005777-T1UNCHARACTERIZED
OS493_005778-T1UNCHARACTERIZED
OS493_005779-T1UNCHARACTERIZED
OS493_005780-T1UNCHARACTERIZED
OS493_005781-T1UNCHARACTERIZED
OS493_005782-T1
OS493_005783-T1
OS493_005784-T1UNCHARACTERIZED
OS493_005785-T1UNCHARACTERIZED
OS493_005786-T1UNCHARACTERIZED
OS493_005787-T1UNCHARACTERIZED
OS493_005788-T1
OS493_005789-T1
OS493_005790-T1INTELECTIN
OS493_005791-T1
OS493_005792-T1NUCLEOTIDE KINASE
OS493_005793-T1GPI-ANCHOR TRANSAMIDASE
OS493_005794-T1SI:CH211-59O9.10
OS493_005795-T1HEN1
OS493_005796-T1
OS493_005797-T1GLOMULIN
OS493_005798-T1GLOMULIN
OS493_005799-T1
OS493_005800-T1
OS493_005801-T1
OS493_005802-T1GLOMULIN
OS493_005803-T1
OS493_005804-T1IGF-LIKE FAMILY RECEPTOR 1
OS493_005805-T1
OS493_005806-T1
OS493_005807-T1
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