About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_005442-T1PEPTIDASE S9 PROLYL OLIGOPEPTIDASE
OS493_005443-T1
OS493_005444-T1PIKACHURIN-LIKE PROTEIN
OS493_005445-T1
OS493_005446-T1NUCLEAR EXPORT MEDIATOR FACTOR NEMF
OS493_005448-T1
OS493_005449-T1NUCLEAR EXPORT MEDIATOR FACTOR NEMF
OS493_005450-T1
OS493_005451-T1
OS493_005452-T1PROTEIN HAPLESS 2
OS493_005453-T1PROTEIN HAPLESS 2
OS493_005454-T1
OS493_005455-T1TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED
OS493_005456-T1AMINOTRANSFERASE
OS493_005457-T1AMINOTRANSFERASE
OS493_005458-T1AMINOTRANSFERASE
OS493_005459-T1AMINOTRANSFERASE
OS493_005460-T1
OS493_005461-T1TSEC-2-RELATED
OS493_005462-T1ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN
OS493_005463-T1
OS493_005464-T1
OS493_005465-T1
OS493_005466-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_005467-T1SID1 TRANSMEMBRANE FAMILY MEMEBER
OS493_005469-T1SID1 TRANSMEMBRANE FAMILY MEMEBER
OS493_005470-T12-HYDROXYACID DEHYDROGENASE-RELATED
OS493_005471-T1
OS493_005472-T1
OS493_005473-T12-HYDROXYACID DEHYDROGENASE-RELATED
OS493_005474-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_005475-T1
OS493_005476-T1
OS493_005477-T1MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 17
OS493_005478-T1
OS493_005479-T1DENDRITIC CELL-SPECIFIC TRANSMEMBRANE PROTEIN
OS493_005480-T1TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN34-RELATED
OS493_005481-T1
OS493_005482-T1
OS493_005483-T1
OS493_005484-T1
OS493_005485-T1
OS493_005486-T1ACYLTRANSFERASE
OS493_005487-T1
OS493_005488-T1
OS493_005489-T1PROTEIN CBG04600
OS493_005490-T1MRNA EXPORT FACTOR AND BUB3
OS493_005491-T1MRNA EXPORT FACTOR AND BUB3
OS493_005492-T1
OS493_005493-T1
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