About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_005595-T1
OS493_005596-T1INOSITOL POLYPHOSPHATE KINASE
OS493_005597-T1
OS493_005598-T1DDB1- AND CUL4-ASSOCIATED FACTOR 4-RELATED
OS493_005599-T1XK-RELATED PROTEIN
OS493_005600-T1CYTOSOLIC PHOSPHOLIPASE A2
OS493_005601-T1CYTOSOLIC PHOSPHOLIPASE A2
OS493_005603-T1CYTOSOLIC PHOSPHOLIPASE A2
OS493_005604-T1ANNEXIN
OS493_005605-T1
OS493_005606-T1ANNEXIN
OS493_005607-T1ANNEXIN
OS493_005608-T1
OS493_005609-T1ANNEXIN
OS493_005610-T1
OS493_005611-T1DNA-DIRECTED RNA POLYMERASE
OS493_005612-T1CARBOHYDRATE SULFOTRANSFERASE
OS493_005613-T1CARBOHYDRATE SULFOTRANSFERASE
OS493_005614-T1ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
OS493_005615-T1
OS493_005616-T1VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 5A
OS493_005617-T1VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 5A
OS493_005618-T1KINESIN-LIKE PROTEIN KIF11
OS493_005619-T1CENTROSOMAL PROTEIN 2
OS493_005620-T1ZINC FINGER, RING/FYVE/PHD-TYPE
OS493_005621-T1
OS493_005622-T1POLY A POLYMERASE
OS493_005623-T1N-ACYLNEURAMINATE-9-PHOSPHATASE
OS493_005624-T1
OS493_005625-T1PHOSPHATIDYLCHOLINE TRANSFER PROTEIN
OS493_005626-T1
OS493_005628-T1
OS493_005629-T1
OS493_005630-T1
OS493_005631-T1HEDGEHOG-INTERACTING PROTEIN
OS493_005632-T1AMINE OXIDASE
OS493_005633-T1
OS493_005634-T1MONOCARBOXYLATE TRANSPORTER
OS493_005635-T1
OS493_005638-T1
OS493_005639-T1MONOCARBOXYLATE TRANSPORTER
OS493_005640-T1BETA-HEXOSAMINIDASE
OS493_005641-T1RBM25 PROTEIN
OS493_005642-T1ANAEROBIC MAGNESIUM-PROTOPORPHYRIN IX MONOMETHYL ESTER CYCLASE-RELATED
OS493_005643-T1
OS493_005644-T1
OS493_005645-T1
OS493_005646-T1
OS493_005647-T1EUKARYOTIC ELONGATION FACTOR 2 KINASE-RELATED
OS493_005648-T1
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