About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_005096-T1
LLU|FUN_005097-T1
LLU|FUN_005098-T1
LLU|FUN_005099-T1
LLU|FUN_005100-T1
LLU|FUN_005101-T1
LLU|FUN_005102-T1
LLU|FUN_005103-T1AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C
LLU|FUN_005104-T1DELTEX-RELATED
LLU|FUN_005105-T1HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
LLU|FUN_005106-T1
LLU|FUN_005107-T1
LLU|FUN_005108-T1
LLU|FUN_005109-T1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
LLU|FUN_005110-T1
LLU|FUN_005111-T1
LLU|FUN_005112-T1
LLU|FUN_005113-T1
LLU|FUN_005114-T1
LLU|FUN_005115-T1
LLU|FUN_005116-T1TYROSINE-PROTEIN KINASE
LLU|FUN_005117-T1
LLU|FUN_005118-T1
LLU|FUN_005119-T1CHARGED MULTIVESICULAR BODY PROTEIN
LLU|FUN_005120-T1UNR PROTEIN N-RAS UPSTREAM GENE PROTEIN
LLU|FUN_005121-T1
LLU|FUN_005122-T1PROTEIN ARGININE N-METHYLTRANSFERASE
LLU|FUN_005123-T1BITESIZE, ISOFORM I
LLU|FUN_005124-T1
LLU|FUN_005125-T1BITESIZE, ISOFORM I
LLU|FUN_005126-T1
LLU|FUN_005127-T1UBIQUITINATION FACTOR E4
LLU|FUN_005128-T1CALCIUM-BINDING PROTEIN 39-RELATED
LLU|FUN_005129-T1-
LLU|FUN_005130-T1
LLU|FUN_005131-T1UNCHARACTERIZED
LLU|FUN_005132-T1
LLU|FUN_005133-T1
LLU|FUN_005134-T1PROTEIN CBG26694
LLU|FUN_005135-T1
LLU|FUN_005136-T1
LLU|FUN_005137-T1
LLU|FUN_005138-T1
LLU|FUN_005139-T1SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING
LLU|FUN_005140-T1
LLU|FUN_005141-T1
LLU|FUN_005142-T1
LLU|FUN_005143-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_005144-T1
LLU|FUN_005145-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
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