About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_005046-T1
LLU|FUN_005047-T1
LLU|FUN_005048-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
LLU|FUN_005049-T1
LLU|FUN_005050-T1
LLU|FUN_005051-T1
LLU|FUN_005052-T1
LLU|FUN_005053-T1
LLU|FUN_005054-T1
LLU|FUN_005055-T1
LLU|FUN_005056-T1B-CELL LYMPHOMA/LEUKEMIA 11
LLU|FUN_005057-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 87
LLU|FUN_005058-T1SPLICING FACTOR SUPPRESSOR OF WHITE APRICOT
LLU|FUN_005059-T1
LLU|FUN_005060-T1REST COREPRESSOR COREST PROTEIN-RELATED
LLU|FUN_005061-T1SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN
LLU|FUN_005062-T1PROTEASE U48 CAAX PRENYL PROTEASE RCE1
LLU|FUN_005063-T1SETA BINDING PROTEIN 1
LLU|FUN_005064-T1CELL DIVISION CYCLE 16,23,27
LLU|FUN_005065-T1INOSITOL-TETRAKISPHOSPHATE 1-KINASE
LLU|FUN_005066-T1ATP-DEPENDENT RNA HELICASE
LLU|FUN_005067-T1TRANSMEMBRANE PROTEIN 251
LLU|FUN_005068-T1RIBOSOMAL PROTEIN S6 KINASE
LLU|FUN_005069-T1AP COMPLEX SUBUNIT MU
LLU|FUN_005070-T1
LLU|FUN_005071-T1MCG131172, ISOFORM CRA_A
LLU|FUN_005072-T1HEAT SHOCK PROTEIN HSP-12.2-RELATED
LLU|FUN_005073-T1ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN
LLU|FUN_005074-T1
LLU|FUN_005075-T1
LLU|FUN_005076-T1EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED
LLU|FUN_005077-T1
LLU|FUN_005078-T1EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED
LLU|FUN_005079-T1
LLU|FUN_005080-T1PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN
LLU|FUN_005081-T1
LLU|FUN_005082-T1-
LLU|FUN_005083-T1N4BP1-RELATED
LLU|FUN_005084-T1SOLUTE CARRIER FAMILY 35
LLU|FUN_005085-T1NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING
LLU|FUN_005086-T1GLUTATHIONE SYNTHETASE
LLU|FUN_005087-T1
LLU|FUN_005088-T1SPERIOLIN
LLU|FUN_005089-T1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
LLU|FUN_005090-T1
LLU|FUN_005091-T1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
LLU|FUN_005092-T1DESMOGLEIN FAMILY MEMBER
LLU|FUN_005093-T1
LLU|FUN_005094-T1WD40 REPEAT PF20
LLU|FUN_005095-T1AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C
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