About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_005069-T1ATP-DEPENDENT PROTEASE
OS493_005070-T15-HYDROXYTRYPTAMINE RECEPTOR
OS493_005071-T1UNCHARACTERIZED
OS493_005072-T15-HYDROXYTRYPTAMINE RECEPTOR
OS493_005073-T1PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT
OS493_005074-T1
OS493_005075-T1PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT
OS493_005076-T1PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT
OS493_005077-T1PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT
OS493_005078-T1
OS493_005079-T1
OS493_005080-T1
OS493_005081-T1
OS493_005082-T1
OS493_005083-T1DNA TOPOISOMERASE I
OS493_005084-T1
OS493_005085-T1LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED
OS493_005086-T1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
OS493_005087-T1SERINE-THREONINE PROTEIN KINASE
OS493_005088-T1
OS493_005089-T1DELTEX-RELATED
OS493_005090-T1BONUS, ISOFORM C-RELATED
OS493_005091-T1
OS493_005092-T1SERINE-THREONINE PROTEIN KINASE
OS493_005093-T1DELTEX-RELATED
OS493_005094-T1
OS493_005095-T1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
OS493_005096-T1INTERFERON-INDUCED PROTEIN 35/NMI N-MYC/STAT INTERACTING PROTEIN
OS493_005097-T1DELTEX-RELATED
OS493_005098-T1
OS493_005099-T1
OS493_005100-T1
OS493_005101-T1DELTEX-RELATED
OS493_005103-T1BONUS, ISOFORM C-RELATED
OS493_005104-T1
OS493_005105-T1SERINE-THREONINE PROTEIN KINASE
OS493_005106-T1
OS493_005107-T1INTERFERON-INDUCED PROTEIN 35/NMI N-MYC/STAT INTERACTING PROTEIN
OS493_005108-T1INTERFERON-INDUCED PROTEIN 35/NMI N-MYC/STAT INTERACTING PROTEIN
OS493_005109-T1BONUS, ISOFORM C-RELATED
OS493_005110-T1BONUS, ISOFORM C-RELATED
OS493_005111-T1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
OS493_005112-T1DELTEX-RELATED
OS493_005113-T1DELTEX-RELATED
OS493_005114-T1DELTEX-RELATED
OS493_005115-T1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
OS493_005116-T1BONUS, ISOFORM C-RELATED
OS493_005117-T1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
OS493_005118-T1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
OS493_005120-T1
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