About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_040433-T1
LLU|FUN_040434-T1
LLU|FUN_040435-T1PR DOMAIN ZINC FINGER PROTEIN
LLU|FUN_040436-T1THAP DOMAIN-CONTAINING
LLU|FUN_040437-T1AGAP005574-PA
LLU|FUN_040438-T1
LLU|FUN_040439-T1
LLU|FUN_040440-T1
LLU|FUN_040441-T1
LLU|FUN_040442-T1
LLU|FUN_040443-T1
LLU|FUN_040444-T1
LLU|FUN_040445-T1RIDDLE
LLU|FUN_040446-T1
LLU|FUN_040447-T1
LLU|FUN_040448-T1
LLU|FUN_040449-T1
LLU|FUN_040450-T1
LLU|FUN_040451-T1
LLU|FUN_040452-T1
LLU|FUN_040453-T1
LLU|FUN_040454-T1
LLU|FUN_040455-T1
LLU|FUN_040456-T1
LLU|FUN_040457-T1
LLU|FUN_040458-T1GLUTAMINE SYNTHETASE
LLU|FUN_040459-T1GLUTAMINE SYNTHETASE
LLU|FUN_040460-T1
LLU|FUN_040461-T1GLUTAMINE SYNTHETASE
LLU|FUN_040462-T1
LLU|FUN_040463-T1
LLU|FUN_040464-T1TASTIN
LLU|FUN_040465-T1ADP RIBOSYLATION FACTOR-RELATED
LLU|FUN_040466-T1PROTEIN CBG05349
LLU|FUN_040467-T1PHENYLALANYL-TRNA SYNTHETASE
LLU|FUN_040468-T1FAT ATYPICAL CADHERIN-RELATED
LLU|FUN_040469-T1FAT ATYPICAL CADHERIN-RELATED
LLU|FUN_040470-T1CADHERIN-23
LLU|FUN_040471-T1
LLU|FUN_040472-T1
LLU|FUN_040473-T1UPF0183 PROTEIN
LLU|FUN_040474-T1TUBULIN POLYGLUTAMYLASE
LLU|FUN_040475-T1RE40534P-RELATED
LLU|FUN_040476-T1FATTY ACID HYDROXYLASE
LLU|FUN_040477-T1FATTY ACID HYDROXYLASE
LLU|FUN_040478-T1FATTY ACID HYDROXYLASE
LLU|FUN_040479-T1CYTOCHROME B5
LLU|FUN_040480-T1ADENOSYLHOMOCYSTEINASE
LLU|FUN_040481-T1
LLU|FUN_040482-T1ADENOSYLHOMOCYSTEINASE
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