About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_040332-T1
LLU|FUN_040333-T1
LLU|FUN_040334-T1
LLU|FUN_040335-T1
LLU|FUN_040336-T1
LLU|FUN_040337-T1
LLU|FUN_040338-T1
LLU|FUN_040339-T1DYNACTIN 1-RELATED MICROTUBULE-BINDING
LLU|FUN_040340-T1
LLU|FUN_040341-T1
LLU|FUN_040342-T1
LLU|FUN_040343-T1
LLU|FUN_040344-T1ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 9-RELATED
LLU|FUN_040345-T1HYPOXIA-INDUCBILE GENE 1 HIG1 -RELATED
LLU|FUN_040346-T1
LLU|FUN_040347-T1
LLU|FUN_040348-T1
LLU|FUN_040349-T1
LLU|FUN_040350-T1
LLU|FUN_040351-T1THIOESTERASE
LLU|FUN_040352-T1
LLU|FUN_040353-T1
LLU|FUN_040354-T1
LLU|FUN_040355-T1PR DOMAIN ZINC FINGER PROTEIN
LLU|FUN_040356-T1
LLU|FUN_040357-T1
LLU|FUN_040358-T1THIOSULFATE SULFERTANSFERASE
LLU|FUN_040359-T1PRE-MRNA SPLICING FACTOR PRP8
LLU|FUN_040360-T1G-PROTEIN COUPLED RECEPTOR 143
LLU|FUN_040361-T1
LLU|FUN_040362-T1
LLU|FUN_040363-T1
LLU|FUN_040364-T1
LLU|FUN_040365-T1
LLU|FUN_040366-T1
LLU|FUN_040367-T1
LLU|FUN_040368-T1-
LLU|FUN_040369-T1
LLU|FUN_040370-T1TETRASPANIN
LLU|FUN_040371-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_040372-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_040373-T1UBIQUITIN LIGASE E3 ALPHA-RELATED
LLU|FUN_040374-T1UDP/ADP-SUGAR PYROPHOSPHATASE
LLU|FUN_040375-T1TESTIS DEVELOPMENT PROTEIN PRTD
LLU|FUN_040376-T1
LLU|FUN_040377-T1
LLU|FUN_040378-T1
LLU|FUN_040379-T1
LLU|FUN_040380-T1TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE
LLU|FUN_040381-T1
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