About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_040282-T1UNCHARACTERIZED
LLU|FUN_040283-T1DYNEIN HEAVY CHAIN
LLU|FUN_040284-T1PORCUPINE
LLU|FUN_040285-T1INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED
LLU|FUN_040286-T1
LLU|FUN_040287-T1
LLU|FUN_040288-T1
LLU|FUN_040289-T1MITOGEN-ACTIVATED PROTEIN KINASE
LLU|FUN_040290-T1MITOGEN-ACTIVATED PROTEIN KINASE
LLU|FUN_040291-T1
LLU|FUN_040292-T1
LLU|FUN_040293-T1TUBULIN MONOGLYCYLASE TTLL3
LLU|FUN_040294-T1F-ACTIN-CAPPING PROTEIN SUBUNIT ALPHA
LLU|FUN_040295-T1
LLU|FUN_040296-T1
LLU|FUN_040297-T1PANTOTHENATE KINASE
LLU|FUN_040298-T1
LLU|FUN_040299-T1LEUCINE RICH REPEAT FAMILY PROTEIN
LLU|FUN_040300-T1TOLL-LIKE RECEPTOR
LLU|FUN_040301-T1
LLU|FUN_040302-T1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
LLU|FUN_040303-T1CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
LLU|FUN_040304-T1CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
LLU|FUN_040305-T1HILLARIN
LLU|FUN_040306-T1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
LLU|FUN_040307-T1
LLU|FUN_040308-T1
LLU|FUN_040309-T1UNCHARACTERIZED
LLU|FUN_040310-T1TETRATRICOPEPTIDE REPEAT PROTEIN 5
LLU|FUN_040311-T1EGF-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_040312-T1
LLU|FUN_040313-T1
LLU|FUN_040314-T1ARMADILLO-LIKE HELICAL DOMAIN CONTAINING PROTEIN 1
LLU|FUN_040315-T1UNCHARACTERIZED
LLU|FUN_040316-T1M-AAA PROTEASE-INTERACTING PROTEIN 1, MITOCHONDRIAL
LLU|FUN_040317-T1
LLU|FUN_040318-T1
LLU|FUN_040319-T1REGULATOR OF G PROTEIN SIGNALING
LLU|FUN_040320-T1
LLU|FUN_040321-T1
LLU|FUN_040322-T1
LLU|FUN_040323-T1
LLU|FUN_040324-T1LEUCINE ZIPPER PROTEIN 4-RELATED
LLU|FUN_040325-T1
LLU|FUN_040326-T1
LLU|FUN_040327-T1
LLU|FUN_040328-T1
LLU|FUN_040329-T1
LLU|FUN_040330-T1
LLU|FUN_040331-T1
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