About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_040026-T1TELOMERE REPEAT-BINDING FACTOR 2-INTERACTING PROTEIN 1
LLU|FUN_040027-T1EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
LLU|FUN_040028-T1VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
LLU|FUN_040029-T1VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
LLU|FUN_040030-T1SI:DKEY-19B23.12-RELATED
LLU|FUN_040034-T1
LLU|FUN_040035-T1
LLU|FUN_040038-T1
LLU|FUN_040040-T1
LLU|FUN_040041-T1
LLU|FUN_040042-T1TRANSCOBALAMIN-1/GASTRIC INTRINSIC FACTOR
LLU|FUN_040043-T1
LLU|FUN_040044-T1TRANSCOBALAMIN-1/GASTRIC INTRINSIC FACTOR
LLU|FUN_040045-T1PHOSPHOLIPASE A-2-ACTIVATING PROTEIN
LLU|FUN_040046-T1SELENIDE, WATER DIKINASE
LLU|FUN_040047-T1
LLU|FUN_040048-T1C3ORF1 PROTEIN-RELATED
LLU|FUN_040049-T1TWINFILIN
LLU|FUN_040050-T1
LLU|FUN_040051-T1RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY
LLU|FUN_040052-T1
LLU|FUN_040053-T1
LLU|FUN_040054-T1
LLU|FUN_040055-T1G PROTEIN-COUPLED RECEPTOR-RELATED
LLU|FUN_040056-T1RAD54-LIKE
LLU|FUN_040057-T1WD REPEAT DOMAIN-RELATED
LLU|FUN_040058-T1
LLU|FUN_040059-T1
LLU|FUN_040060-T1CADHERIN-23
LLU|FUN_040061-T1PROTEIN BARK BEETLE
LLU|FUN_040062-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_040063-T1
LLU|FUN_040064-T1
LLU|FUN_040065-T1
LLU|FUN_040066-T1
LLU|FUN_040067-T1
LLU|FUN_040068-T1
LLU|FUN_040069-T1
LLU|FUN_040070-T1
LLU|FUN_040071-T1PROTEIN CBG12054-RELATED
LLU|FUN_040072-T1
LLU|FUN_040073-T1PROTEIN CBG12054-RELATED
LLU|FUN_040074-T1
LLU|FUN_040075-T1PROTEIN CBG12054-RELATED
LLU|FUN_040076-T1
LLU|FUN_040077-T1
LLU|FUN_040078-T1PROTEIN CBG12054-RELATED
LLU|FUN_040079-T1FTP DOMAIN-CONTAINING PROTEIN
LLU|FUN_040080-T1PROTEIN CBG12054-RELATED
LLU|FUN_040081-T1
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