About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_039824-T1
LLU|FUN_039825-T1
LLU|FUN_039826-T1NOP14
LLU|FUN_039827-T1NOP14
LLU|FUN_039828-T1NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE
LLU|FUN_039829-T1MSF1/PX19 RELATED
LLU|FUN_039830-T1
LLU|FUN_039831-T1
LLU|FUN_039832-T1IONOTROPIC RECEPTOR 20A-RELATED
LLU|FUN_039833-T1
LLU|FUN_039834-T1
LLU|FUN_039835-T1OS12G0117600 PROTEIN
LLU|FUN_039836-T1PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED
LLU|FUN_039837-T1PROLINE-RICH NUCLEAR RECEPTOR COACTIVATOR
LLU|FUN_039838-T1
LLU|FUN_039839-T1CHORDIN
LLU|FUN_039840-T1TRANSCRIPTIONAL REPRESSOR PROTEIN YY
LLU|FUN_039841-T1
LLU|FUN_039842-T1
LLU|FUN_039843-T1
LLU|FUN_039844-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_039845-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_039846-T1MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED
LLU|FUN_039847-T1MANNOSE-6-PHOSPHATE RECEPTOR FAMILY MEMBER
LLU|FUN_039848-T1E3 UBIQUITIN-PROTEIN LIGASE TRAIP
LLU|FUN_039849-T1
LLU|FUN_039850-T1DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL
LLU|FUN_039852-T1
LLU|FUN_039853-T1
LLU|FUN_039854-T1ACID PHOSPHATASE-RELATED
LLU|FUN_039855-T1
LLU|FUN_039856-T1ACID PHOSPHATASE-RELATED
LLU|FUN_039857-T1ADENOMATOUS POLYPOSIS COLI PROTEIN FAMILY
LLU|FUN_039858-T1
LLU|FUN_039859-T1ADENOMATOUS POLYPOSIS COLI PROTEIN FAMILY
LLU|FUN_039860-T1
LLU|FUN_039861-T1
LLU|FUN_039862-T1
LLU|FUN_039863-T1
LLU|FUN_039864-T1SOLUTE CARRIER FAMILY 13 MEMBER
LLU|FUN_039865-T1-
LLU|FUN_039866-T1MAX DIMERIZATION, MAD
LLU|FUN_039867-T1
LLU|FUN_039868-T1
LLU|FUN_039869-T1
LLU|FUN_039870-T1
LLU|FUN_039871-T1
LLU|FUN_039872-T1
LLU|FUN_039873-T1PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
LLU|FUN_039874-T1
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