About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS03801FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS
HS03802EPOXIDE HYDROLASE
HS03803UNCHARACTERIZED
HS03804HYPOTHETICAL PROTEIN LOC689986
HS03805GLOMULIN
HS03806ODD-SKIPPED - RELATED
HS03807
HS03808RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
HS03809RIBOSOMAL PROTEIN L5-RELATED
HS03810UNCHARACTERIZED
HS03811
HS03812VILLIN
HS03813PROTEIN DR1
HS03814URIDINE KINASE
HS03815PNAS-RELATED
HS03816ALDEHYDE DEHYDROGENASE-RELATED
HS03817MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 8
HS03818HOMEOBOX PROTEIN TRANSCRIPTION FACTORS
HS03819
HS03820GLUTAMINE SYNTHETASE
HS03821FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED
HS03822RGPR-RELATED
HS03823GROWTH ARREST AND DNA DAMAGE-INDUCIBLE PROTEIN GADD45
HS03824
HS03825GUANINE NUCLEOTIDE-BINDING PROTEIN GAMMA SUBUNIT
HS03826GEO07735P1-RELATED-RELATED
HS03827PROTEIN DR1
HS03828PROTEIN MAGO NASHI HOMOLOG
HS03829CARNITINE O-ACYLTRANSFERASE
HS03830PROTEIN DR1
HS03831AATF PROTEIN APOPTOSIS ANTAGONIZING TRANSCRIPTION FACTOR
HS03832PROTEIN MAGO NASHI HOMOLOG
HS03833STEROL CARRIER PROTEIN 2 SCP-2 FAMILY PROTEIN
HS03834AGAP008170-PA
HS03835SODIUM/DICARBOXYLATE SYMPORTER-RELATED
HS03836SHISA
HS03837UNCHARACTERIZED
HS03838ALDO/KETO REDUCTASE
HS03839SERINE/THREONINE-PROTEIN KINASE KIST
HS03840DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
HS03841CALCIUM-ACTIVATED POTASSIUM CHANNEL SUBUNIT BETA
HS03842WD40 REPEAT PROTEIN
HS03843NARDILYSIN
HS03844LD44762P
HS03845INTERFERON-INDUCED PROTEIN WITH TETRATRICOPEPTIDE REPEATS
HS03846UNCHARACTERIZED
HS03847CELL DIVISION CONTROL PROTEIN 6-RELATED
HS03848
HS03849
HS03850CELL DIVISION CONTROL PROTEIN 6-RELATED
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