About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m，which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS03901VALACYCLOVIR HYDROLASE
HS03902VALACYCLOVIR HYDROLASE
HS03903DUAL SPECIFICITY PROTEIN PHOSPHATASE DDB_G0269404-RELATED
HS03904INTERFERON REGULATORY FACTOR
HS03905EXOCYST COMPLEX COMPONENT SEC5
HS03906FORKHEAD BOX PROTEIN
HS03907FORKHEAD BOX PROTEIN BINIOU
HS03908FORKHEAD BOX PROTEIN
HS03909GDP-MANNOSE 4,6-DEHYDRATASE
HS03910SERINE/THREONINE-PROTEIN KINASE
HS03911SERINE PROTEASE INHIBITOR, SERPIN
HS03912GDP-L-FUCOSE SYNTHASE
HS03913PROTEIN GAMETE EXPRESSED 1
HS03914PYRROLINE-5-CARBOXYLATE REDUCTASE
HS03915
HS03916EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER
HS03917PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER
HS03918FETUIN
HS03919FETUIN
HS03920REGULATOR OF G PROTEIN SIGNALING
HS03921REGULATOR OF G PROTEIN SIGNALING
HS03922REGULATOR OF G PROTEIN SIGNALING
HS03923REGULATOR OF G PROTEIN SIGNALING
HS03924FOLATE TRANSPORTER
HS03925MACPF DOMAIN-CONTAINING PROTEIN
HS03926PROTEIN CBG26694
HS03927MACPF DOMAIN-CONTAINING PROTEIN
HS03928REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS03929REGULATOR OF G PROTEIN SIGNALING
HS03930REGULATOR OF G PROTEIN SIGNALING
HS03931REGULATOR OF G PROTEIN SIGNALING
HS03932REGULATOR OF G PROTEIN SIGNALING
HS03933UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
HS03934-
HS03935BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
HS03936PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
HS03937ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
HS03938COMPLEMENT FACTOR H-RELATED
HS03939UNCHARACTERIZED
HS03940DEP DOMAIN-CONTAINING
HS03941BETA-CAROTENE DIOXYGENASE
HS03942ACETYL, PROPIONYL, PYRUVATE, AND GLUTACONYL CARBOXYLASE-RELATED
HS03943FCH AND DOUBLE SH3 DOMAINS PROTEIN
HS03944
HS03945BREAST CANCER ANTI-ESTROGEN RESISTANCE PROTEIN 3 HOMOLOG-LIKE PROTEIN
HS03946HERMANSKY-PUDLAK SYNDROME 3 PROTEIN
HS03947REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS03948
HS03949TETRATRICOPEPTIDE REPEAT PROTEIN 14
HS03950
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