About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m，which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS03851UNCHARACTERIZED
HS03852INTERFERON-INDUCED PROTEIN WITH TETRATRICOPEPTIDE REPEATS
HS03853
HS03854INTERFERON-INDUCED PROTEIN WITH TETRATRICOPEPTIDE REPEATS
HS03855INTERFERON-INDUCED PROTEIN WITH TETRATRICOPEPTIDE REPEATS
HS03856INTERFERON-INDUCED PROTEIN WITH TETRATRICOPEPTIDE REPEATS
HS03857N 2 ,N 2 -DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE
HS03858NIBAN FAMILY MEMBER
HS03859KINESIN-ASSOCIATED PROTEINS
HS03860AD-003 - RELATED
HS03861RAB6-INTERACTING PROTEIN GORAB
HS03862PAIRED MESODERM HOMEOBOX PROTEIN 1-RELATED
HS03863MYOMEGALIN
HS03864SERINE/THREONINE-PROTEIN KINASE
HS03865PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT
HS03866TETRASPANIN
HS03867PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1
HS03868INTERFERON-INDUCED PROTEIN WITH TETRATRICOPEPTIDE REPEATS
HS03869GLUTATHIONE PEROXIDASE
HS03870POLY A POLYMERASE CID PAP -RELATED
HS03871
HS03872TBC1 DOMAIN FAMILY MEMBER 7
HS03873PHOSPHATASE AND ACTIN REGULATOR PHACTR
HS03874NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED
HS03875ADENYLATE CYCLASE TYPE 1
HS03876INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN
HS03877INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN
HS03878TENSIN
HS03879NICOTINATE PHOSPHORIBOSYLTRANSFERASE
HS03880-
HS03881
HS03882UPF0598 PROTEIN C8ORF82
HS03883PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
HS03884ALANINE AMINOTRANSFERASE
HS03885CHYMOTRYPSIN-LIKE ELASTASE FAMILY MEMBER
HS03886PROTEIN CBG26694
HS03887REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS03888F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
HS03889PDF RECEPTOR-LIKE PROTEIN-RELATED
HS03890PDF RECEPTOR-LIKE PROTEIN-RELATED
HS0389140S RIBOSOMAL PROTEIN S3A
HS03892CCCH ZINGC FINGER
HS03893TRANSCRIPTION FACTOR MAF
HS03894CHAPERONE ATP11
HS03895RHOPHILIN
HS03896ENVOPLAKIN
HS03897ENVOPLAKIN
HS03898REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS03899REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS03900SOLUTE CARRIER FAMILY 22 MEMBER
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