About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent~1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

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Gene IDDescription
Clavulariidae_g9982SI:CH211-108C17.2-RELATED-RELATED
Clavulariidae_g9983C2H2-TYPE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g9984UNCHARACTERIZED
Clavulariidae_g9985REVERSE TRANSCRIPTASES
Clavulariidae_g9986ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g9987RETROTRANSPOSON
Clavulariidae_g9988INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED
Clavulariidae_g9989DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A
Clavulariidae_g999RETROTRANSPOSON
Clavulariidae_g9990ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
Clavulariidae_g9991
Clavulariidae_g9992UNCHARACTERIZED
Clavulariidae_g9993
Clavulariidae_g9994CXXC-TYPE ZINC FINGER PROTEIN 1
Clavulariidae_g9995
Clavulariidae_g9996THAP DOMAIN-CONTAINING PROTEIN 6
Clavulariidae_g9997
Clavulariidae_g9998EXPRESSED PROTEIN
Clavulariidae_g9999
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