About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 675 676 677 678 679 680 681 682 683 684 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_036766-T1CHROMOBOX PROTEIN
OS493_036767-T1IQ CALMODULIN-BINDING MOTIF CONTAINING PROTEIN 1
OS493_036768-T1WD40 REPEAT PROTEIN 12, 37
OS493_036769-T1
OS493_036770-T1ATAXIN-7-LIKE PROTEIN 3
OS493_036771-T1LEUCINE RICH REPEAT PROTEIN
OS493_036772-T1DNA HELICASE RECQ FAMILY MEMBER
OS493_036773-T1
OS493_036774-T1
OS493_036775-T1MONOCARBOXYLATE TRANSPORTER
OS493_036776-T1
OS493_036777-T1-
OS493_036778-T1
OS493_036781-T1
OS493_036782-T1EUKARYOTIC ELONGATION FACTOR 2 KINASE-RELATED
OS493_036783-T1
OS493_036784-T1
OS493_036785-T1N6-ADENOSINE-METHYLTRANSFERASE
OS493_036786-T1SYNEMBRYN
OS493_036787-T1EPH RECEPTOR A5
OS493_036788-T1U4/U6-ASSOCIATED RNA SPLICING FACTOR-RELATED
OS493_036789-T1FLAP ENDONUCLEASE FAMILY MEMBER
OS493_036790-T1
OS493_036791-T1
OS493_036792-T1
OS493_036793-T1GLUCOSYLCERAMIDASE
OS493_036794-T1ANOCTAMIN
OS493_036795-T1
OS493_036796-T1
OS493_036797-T1
OS493_036798-T1SODIUM/POTASSIUM/CALCIUM EXCHANGER
OS493_036799-T1GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED
OS493_036800-T1
OS493_036802-T1TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)
OS493_036803-T1
OS493_036804-T1MAP KINASE KINASE KINASE SSK2-RELATED-RELATED
OS493_036805-T1
OS493_036806-T1REGULATOR-RELATED
OS493_036807-T1
OS493_036808-T1SER/THR-PROTEIN KINASE RIO2
OS493_036809-T1
OS493_036810-T1NADH-UBIQUINONE OXIDOREDUCTASE 39 KDA SUBUNIT-RELATED
OS493_036811-T1POS9-ACTIVATING FACTOR FAP7-RELATED
OS493_036812-T1
OS493_036813-T1MITOCHONDRIAL RIBOSOMAL PROTEIN L37
OS493_036814-T1
OS493_036815-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_036816-T1COMPLEMENT COMPONENT C6
OS493_036817-T1RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR
OS493_036818-T1
TOP