About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 630 631 632 633 634 635 636 637 638 639 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_034303-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_034304-T1
OS493_034305-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_034306-T1STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE
OS493_034307-T1STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE
OS493_034308-T1RBPJ-INTERACTING AND TUBULIN-ASSOCIATED PROTEIN 1
OS493_034309-T1RETINOVIN-RELATED
OS493_034310-T1CYSTEINE PROTEASE FAMILY C1-RELATED
OS493_034311-T1CYSTEINE PROTEASE FAMILY C1-RELATED
OS493_034312-T1SERINE/THREONINE-PROTEIN KINASE RIO1
OS493_034313-T1FAMILY WITH SEQUENCE SIMILARITY 216 MEMBER A
OS493_034314-T1
OS493_034315-T1CONTACTIN 5
OS493_034316-T1
OS493_034317-T1
OS493_034318-T1
OS493_034319-T13-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED
OS493_034320-T1
OS493_034321-T13-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED
OS493_034322-T1SAM DOMAIN-CONTAINING PROTEIN-RELATED
OS493_034323-T1G PATCH DOMAIN CONTAINING PROTEIN 2
OS493_034324-T1G PATCH DOMAIN CONTAINING PROTEIN 2
OS493_034325-T1MULTICOPPER OXIDASE-RELATED
OS493_034326-T1ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
OS493_034329-T1
OS493_034330-T1
OS493_034332-T1
OS493_034333-T1
OS493_034334-T1
OS493_034335-T1DNA2/NAM7 HELICASE FAMILY
OS493_034336-T1
OS493_034337-T1DNA2/NAM7 HELICASE FAMILY
OS493_034338-T1
OS493_034339-T1
OS493_034340-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_034341-T1CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 70
OS493_034342-T1
OS493_034343-T1
OS493_034344-T1
OS493_034345-T1
OS493_034346-T1D-TYROSYL-TRNA TYR DEACYLASE
OS493_034347-T1REST COREPRESSOR COREST PROTEIN-RELATED
OS493_034348-T1
OS493_034349-T1NG37
OS493_034350-T1OS-9-RELATED
OS493_034351-T1
OS493_034352-T1
OS493_034353-T1
OS493_034354-T1
OS493_034355-T1THREONINE SYNTHASE FAMILY MEMBER
TOP