About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_62588-0.0
Bpl_scaf_62588-0.1
Bpl_scaf_62593-0.7SERINE-THREONINE PROTEIN KINASE
Bpl_scaf_62595-0.2
Bpl_scaf_62597-0.0
Bpl_scaf_62599-0.2COPINE
Bpl_scaf_62600-0.3ANKYRIN DOMAIN-CONTAINING
Bpl_scaf_62611-0.0
Bpl_scaf_62624-0.0
Bpl_scaf_62624-0.1
Bpl_scaf_62644-0.6APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
Bpl_scaf_62654-0.6
Bpl_scaf_62654-0.7RIBOSOMAL RNA METHYLTRANSFERASE
Bpl_scaf_62665-0.6
Bpl_scaf_62691-0.16MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Bpl_scaf_62691-0.8COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Bpl_scaf_62702-0.5BONUS, ISOFORM C-RELATED
Bpl_scaf_62711-0.10METHYLTRANSFERASE-LIKE PROTEIN 24
Bpl_scaf_62711-0.11SRCR DOMAIN-CONTAINING PROTEIN
Bpl_scaf_62726-0.11
Bpl_scaf_62726-0.12
Bpl_scaf_62726-0.13
Bpl_scaf_62731-0.2G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_62731-0.4G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_62741-0.10CATION-TRANSPORTING ATPASE-RELATED
Bpl_scaf_62741-0.3
Bpl_scaf_62745-0.0
Bpl_scaf_62755-0.6EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Bpl_scaf_62759-0.6TUMOR PROTEIN P53-INDUCIBLE PROTEIN 11
Bpl_scaf_62767-0.26
Bpl_scaf_62767-0.30
Bpl_scaf_62771-0.2
Bpl_scaf_62771-0.5
Bpl_scaf_62771-0.6
Bpl_scaf_62785-0.14
Bpl_scaf_62785-0.16MULTIPLE EPIDERMAL GROWTH FACTOR-LIKE DOMAINS PROTEIN
Bpl_scaf_62796-0.2EXPRESSED PROTEIN
Bpl_scaf_62797-0.10RAB FAMILY
Bpl_scaf_62797-0.8BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST
Bpl_scaf_62797-1.2
Bpl_scaf_62797-1.5PEROXISOME ASSEMBLY PROTEIN 10
Bpl_scaf_62797-1.6STERILE20-LIKE KINASE, ISOFORM B-RELATED
Bpl_scaf_62797-3.0
Bpl_scaf_62797-4.5LAR INTERACTING PROTEIN LIP -RELATED PROTEIN
Bpl_scaf_62797-4.6UNCHARACTERIZED
Bpl_scaf_62797-4.7LAR INTERACTING PROTEIN LIP -RELATED PROTEIN
Bpl_scaf_62797-6.10CONDENSIN
Bpl_scaf_62797-6.12CONDENSIN
Bpl_scaf_62797-6.13CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING
Bpl_scaf_62811-0.11
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