About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_62386-0.21POLYCYSTIN-1
Bpl_scaf_62386-0.22POLYCYSTIN FAMILY MEMBER
Bpl_scaf_62396-0.13
Bpl_scaf_62396-0.14
Bpl_scaf_62396-0.16
Bpl_scaf_62396-0.5
Bpl_scaf_624-0.0
Bpl_scaf_62402-0.17CEREBELLIN-RELATED
Bpl_scaf_62402-0.19CEREBELLIN-RELATED
Bpl_scaf_62402-0.25CEREBELLIN-RELATED
Bpl_scaf_62402-0.26CEREBELLIN-RELATED
Bpl_scaf_62402-0.28CEREBELLIN-RELATED
Bpl_scaf_62402-0.29CEREBELLIN-RELATED
Bpl_scaf_62402-0.3
Bpl_scaf_62402-0.30CEREBELLIN-RELATED
Bpl_scaf_62402-0.31CEREBELLIN-RELATED
Bpl_scaf_62402-0.33CEREBELLIN-RELATED
Bpl_scaf_62402-0.58CEREBELLIN-RELATED
Bpl_scaf_62402-0.59CEREBELLIN-RELATED
Bpl_scaf_62402-0.60CEREBELLIN-RELATED
Bpl_scaf_62402-0.61CEREBELLIN-RELATED
Bpl_scaf_62409-0.16G DOMAIN-CONTAINING PROTEIN
Bpl_scaf_62409-0.21ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING
Bpl_scaf_62409-0.9G DOMAIN-CONTAINING PROTEIN
Bpl_scaf_62417-0.15
Bpl_scaf_62417-0.19PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Bpl_scaf_62417-0.28PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Bpl_scaf_62417-0.29
Bpl_scaf_62417-0.30SIDESTEP PROTEIN
Bpl_scaf_62418-0.0
Bpl_scaf_62418-0.3
Bpl_scaf_62418-0.8
Bpl_scaf_62418-1.12RNA_LIG_T4_1 DOMAIN-CONTAINING PROTEIN
Bpl_scaf_62418-1.13CASEIN KINASE II SUBUNIT ALPHA
Bpl_scaf_62418-1.21ORF PROTEIN
Bpl_scaf_62418-2.16SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Bpl_scaf_62418-2.2SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Bpl_scaf_62418-2.6UNCHARACTERIZED
Bpl_scaf_62418-3.6SI:CH211-262H13.3-RELATED-RELATED
Bpl_scaf_62418-3.7D-LACTATE DEHYDROGENASE
Bpl_scaf_62418-4.15
Bpl_scaf_62418-4.18DOLICHOL-PHOSPHATE MANNOSYLTRANSFERASE SUBUNIT 1
Bpl_scaf_62418-4.25DUAL SPECIFICITY PROTEIN KINASE
Bpl_scaf_62418-4.27BEIGE/BEACH-RELATED
Bpl_scaf_62418-4.30
Bpl_scaf_62418-5.0PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT
Bpl_scaf_62418-5.2NF-KAPPA-B INHIBITOR-INTERACTING RAS-LIKE PROTEIN
Bpl_scaf_62418-6.14
Bpl_scaf_62418-6.15
Bpl_scaf_62418-6.2
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