About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_61969-6.23
Bpl_scaf_61969-6.35AMINOTRANSFERASE
Bpl_scaf_61969-6.8BTB/POZ DOMAIN-CONTAINING PROTEIN 19
Bpl_scaf_61969-7.5ANKYRIN REPEAT PROTEIN
Bpl_scaf_61969-7.6RHO GTPASE-ACTIVATING PROTEIN 100F
Bpl_scaf_61969-8.0LITHOSTATHINE
Bpl_scaf_61969-8.4
Bpl_scaf_61969-8.8
Bpl_scaf_61972-0.3
Bpl_scaf_61973-0.17ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_61973-1.2ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_61973-2.1
Bpl_scaf_61973-2.14
Bpl_scaf_61973-3.3
Bpl_scaf_61974-0.0
Bpl_scaf_61979-0.0IGGFC_BINDING DOMAIN-CONTAINING PROTEIN
Bpl_scaf_61980-0.1CYSTEINE-RICH SECRETORY PROTEIN-RELATED
Bpl_scaf_61984-0.2NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1
Bpl_scaf_61984-1.13
Bpl_scaf_61984-1.37NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1
Bpl_scaf_61984-1.6NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1
Bpl_scaf_61984-1.7DNA HELICASE-RELATED
Bpl_scaf_61984-1.8ZINC FINGER PROTEIN
Bpl_scaf_61984-2.6ENDORIBONUCLEASE LACTB2
Bpl_scaf_61984-2.7SERINE/THREONINE-PROTEIN KINASE TAO
Bpl_scaf_61984-3.20UBIQUITIN SPECIFIC PROTEINASE
Bpl_scaf_61984-3.27CYTOCHROME P450 508A4-RELATED
Bpl_scaf_61984-3.28CYTOCHROME P450 508A4-RELATED
Bpl_scaf_61984-3.30CYTOCHROME P450 508A4-RELATED
Bpl_scaf_61984-3.31CYTOCHROME P450 508A4-RELATED
Bpl_scaf_61984-3.4HEME-BINDING MONOOXYGENASE FAMILY
Bpl_scaf_61985-0.10CAVEOLIN
Bpl_scaf_61985-0.25
Bpl_scaf_61985-0.26
Bpl_scaf_61985-0.27CAVEOLIN
Bpl_scaf_61985-0.28CAVEOLIN
Bpl_scaf_61985-0.3CAVEOLIN
Bpl_scaf_61985-1.10ALPHA-L-FUCOSIDASE
Bpl_scaf_61985-1.11ALPHA-L-FUCOSIDASE
Bpl_scaf_61985-1.13IKB KINASE
Bpl_scaf_61985-1.14ALPHA-L-FUCOSIDASE
Bpl_scaf_61985-10.0CONTACTIN 5
Bpl_scaf_61985-10.14RNA-BINDING PROTEIN
Bpl_scaf_61985-10.16MITOCHONDRIAL 39S RIBOSOMAL PROTEIN L42
Bpl_scaf_61985-10.17C3ORF1 PROTEIN-RELATED
Bpl_scaf_61985-10.18
Bpl_scaf_61985-10.19
Bpl_scaf_61985-10.20
Bpl_scaf_61985-11.18
Bpl_scaf_61985-11.20SERINE PEPTIDASE S9 FAMILY MEMBER
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