About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_61492-0.20
Bpl_scaf_61492-0.9
Bpl_scaf_61494-0.5MYOTUBULARIN-RELATED
Bpl_scaf_61496-0.3TITIN
Bpl_scaf_61500-0.3
Bpl_scaf_61503-0.1
Bpl_scaf_61504-0.4
Bpl_scaf_61512-0.0
Bpl_scaf_61514-0.2BTB/POZ DOMAIN-CONTAINING
Bpl_scaf_61515-0.0BONUS, ISOFORM C-RELATED
Bpl_scaf_61517-0.3MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_61518-1.1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_61518-2.1
Bpl_scaf_61518-3.17LEUCOKININ RECEPTOR-RELATED
Bpl_scaf_61518-3.18ATP-DEPENDENT DNA HELICASE
Bpl_scaf_61518-3.20GLYCEROL-3-PHOSPHATE DEHYDROGENASE
Bpl_scaf_61518-3.21VACUOLAR PROTEIN SORTING VPS41
Bpl_scaf_61519-0.0
Bpl_scaf_61524-0.0
Bpl_scaf_61527-0.4OLIGORIBONUCLEASE, MITOCHONDRIAL
Bpl_scaf_61528-0.0
Bpl_scaf_61529-0.4INTERLEUKIN ENHANCER-BINDING FACTOR
Bpl_scaf_61529-1.11
Bpl_scaf_61529-1.4CXC DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_61529-3.172-5 OLIGOADENYLATE SYNTHETASE
Bpl_scaf_61529-3.182-5 OLIGOADENYLATE SYNTHETASE
Bpl_scaf_61529-3.19TYROSINE-PROTEIN KINASE RECEPTOR
Bpl_scaf_61529-3.21SI:DKEY-57N24.6
Bpl_scaf_61529-3.27
Bpl_scaf_61529-3.29
Bpl_scaf_61530-0.0
Bpl_scaf_61531-0.1CHITINASE
Bpl_scaf_61531-0.2CHITINASE
Bpl_scaf_61532-0.0
Bpl_scaf_61535-0.0DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER
Bpl_scaf_61538-0.4
Bpl_scaf_61538-0.6
Bpl_scaf_61538-0.7
Bpl_scaf_61540-0.1ETS
Bpl_scaf_61540-1.2ETS
Bpl_scaf_61540-3.13FORMIN-BINDING PROTEIN 4
Bpl_scaf_61540-3.16SYNEMBRYN
Bpl_scaf_61540-3.22SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Bpl_scaf_61540-3.24GALACTOSE-3-O-SULFOTRANSFERASE
Bpl_scaf_61551-0.0AGAP008005-PA
Bpl_scaf_61552-0.10WD40 REPEAT PROTEIN
Bpl_scaf_61552-0.11WD40 REPEAT PROTEIN
Bpl_scaf_61552-0.12WD40 REPEAT PROTEIN
Bpl_scaf_61552-0.6RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED
Bpl_scaf_61552-2.7COLLAGEN ALPHA
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