About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_61401-1.0
Bpl_scaf_61401-2.13
Bpl_scaf_61401-2.22
Bpl_scaf_61401-2.23DEATH DOMAIN-CONTAINING PROTEIN CRADD
Bpl_scaf_61401-2.24
Bpl_scaf_61401-2.25
Bpl_scaf_61403-0.2
Bpl_scaf_61404-0.1
Bpl_scaf_61407-0.0OSJNBA0004B13.7 PROTEIN
Bpl_scaf_61411-0.0
Bpl_scaf_61411-2.12EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN
Bpl_scaf_61411-2.13
Bpl_scaf_61411-2.9
Bpl_scaf_61412-0.0
Bpl_scaf_61412-0.2
Bpl_scaf_61412-0.5
Bpl_scaf_61415-0.2
Bpl_scaf_61421-0.3DNA HELICASE RECQ FAMILY MEMBER
Bpl_scaf_61421-0.5
Bpl_scaf_61421-1.8BARDET-BIEDL SYNDROME PROTEIN 5
Bpl_scaf_61421-1.9ATP-DEPENDENT RNA HELICASE DBP3
Bpl_scaf_61421-2.224.1 G PROTEIN
Bpl_scaf_61421-2.26
Bpl_scaf_61421-2.27
Bpl_scaf_61421-2.29SERINE/THREONINE PROTEIN KINASE
Bpl_scaf_61424-0.7CRUMBS FAMILY MEMBER
Bpl_scaf_61426-0.6POLY [ADP-RIBOSE] POLYMERASE
Bpl_scaf_61430-0.0
Bpl_scaf_61432-0.4
Bpl_scaf_61432-0.9FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_61432-1.10OS01G0750732 PROTEIN
Bpl_scaf_61432-1.11MYOSIN HEAVY CHAIN, NON-MUSCLE
Bpl_scaf_61432-1.9DISULFIDE OXIDOREDUCTASE
Bpl_scaf_61432-2.22
Bpl_scaf_61432-2.24MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B
Bpl_scaf_61432-2.25
Bpl_scaf_61432-2.26CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR
Bpl_scaf_61432-2.38
Bpl_scaf_61432-2.39UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Bpl_scaf_61432-2.40PRE-MRNA SPLICING FACTOR-RELATED
Bpl_scaf_61432-2.41
Bpl_scaf_61432-2.43
Bpl_scaf_61490-0.0LOC100145250 PROTEIN
Bpl_scaf_61490-0.13FI04643P-RELATED
Bpl_scaf_61490-0.15
Bpl_scaf_61490-0.19EGF-LIKE-DOMAIN, MULTIPLE 7, 8
Bpl_scaf_61490-0.20
Bpl_scaf_61491-0.0POTASSIUM CHANNEL, SUBFAMILY K
Bpl_scaf_61492-0.14
Bpl_scaf_61492-0.18
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