About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_62198-0.0
Bpl_scaf_62198-0.1
Bpl_scaf_62198-0.3
Bpl_scaf_62214-0.3
Bpl_scaf_62214-0.5ZINC FINGER PROTEIN
Bpl_scaf_62215-2.0
Bpl_scaf_62215-2.1INNEXIN
Bpl_scaf_62215-2.3CORTISTATIN
Bpl_scaf_62215-3.4BETA-1,4-GALACTOSYLTRANSFERASE
Bpl_scaf_62215-3.5
Bpl_scaf_62215-4.10ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_62215-4.9RETICULOCALBIN
Bpl_scaf_62215-5.13RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Bpl_scaf_62215-5.21ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_62215-5.22NEUROTRANSMITTER GATED ION CHANNEL
Bpl_scaf_62215-5.44
Bpl_scaf_62215-5.53ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_62215-5.54ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_62223-0.19
Bpl_scaf_62223-0.20
Bpl_scaf_62223-0.21
Bpl_scaf_62231-0.7RHO FAMILY GTPASE
Bpl_scaf_62231-0.8IGGFC_BINDING DOMAIN-CONTAINING PROTEIN
Bpl_scaf_62249-0.13LIPOXYGENASE
Bpl_scaf_6225-0.0
Bpl_scaf_62257-0.16UNCHARACTERIZED
Bpl_scaf_62257-0.7U4/U6-ASSOCIATED RNA SPLICING FACTOR-RELATED
Bpl_scaf_62257-0.8SULFOTRANSFERASE SULT
Bpl_scaf_62268-0.10
Bpl_scaf_62268-0.15
Bpl_scaf_62289-0.7MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3
Bpl_scaf_62297-0.4
Bpl_scaf_62306-0.11
Bpl_scaf_62306-0.7
Bpl_scaf_62334-0.12ANNEXIN
Bpl_scaf_62334-0.13GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2
Bpl_scaf_62361-0.2
Bpl_scaf_62361-0.8
Bpl_scaf_62370-0.10
Bpl_scaf_62370-0.11TYROSINE-PROTEIN KINASE RECEPTOR
Bpl_scaf_62370-0.12
Bpl_scaf_62370-0.13
Bpl_scaf_62370-0.6
Bpl_scaf_62379-0.18INACTIVE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP6
Bpl_scaf_62379-0.20MOLTING PROTEIN MLT-4
Bpl_scaf_62379-0.21ROLLING PEBBLES, ISOFORM B
Bpl_scaf_62379-0.62
Bpl_scaf_62379-0.66
Bpl_scaf_62379-0.8
Bpl_scaf_62386-0.15POLYCYSTIN FAMILY MEMBER
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