About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_61985-11.22
Bpl_scaf_61985-11.23SPHINGOSINE KINASE
Bpl_scaf_61985-11.45PROTEIN DD3-3
Bpl_scaf_61985-11.46DEOXYRIBONUCLEASE
Bpl_scaf_61985-11.48PROTEIN DD3-3
Bpl_scaf_61985-2.10UNCHARACTERIZED
Bpl_scaf_61985-2.12RIB43A-RELATED
Bpl_scaf_61985-2.5
Bpl_scaf_61985-2.9STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER
Bpl_scaf_61985-3.13DYNEIN HEAVY CHAIN
Bpl_scaf_61985-4.4TRNA PSEUDOURIDINE SYNTHASE D
Bpl_scaf_61985-4.5SERINE/THREONINE-PROTEIN KINASE
Bpl_scaf_61985-4.6
Bpl_scaf_61985-5.10JITTERBUG, ISOFORM N
Bpl_scaf_61985-5.23JITTERBUG, ISOFORM N
Bpl_scaf_61985-6.0CENTROSOMAL PROTEIN OF 170 KDA
Bpl_scaf_61985-7.4
Bpl_scaf_61985-7.8UNCHARACTERIZED
Bpl_scaf_61985-9.5SYNAPTIC ADHESION-LIKE MOLECULE SALM
Bpl_scaf_61985-9.9
Bpl_scaf_61986-0.0
Bpl_scaf_61987-0.5
Bpl_scaf_61988-0.5
Bpl_scaf_61990-0.5OS10G0105400 PROTEIN
Bpl_scaf_61993-0.0
Bpl_scaf_61993-0.4
Bpl_scaf_61996-0.3EPITHELIAL MEMBRANE PROTEIN-RELATED
Bpl_scaf_61997-0.0FORKHEAD BOX PROTEIN
Bpl_scaf_62006-0.0
Bpl_scaf_62006-0.3
Bpl_scaf_62037-0.6VASCULAR CELL ADHESION MOLECULE 1
Bpl_scaf_62037-0.7DNA REPAIR/TRANSCRIPTION PROTEIN MET18/MMS19
Bpl_scaf_62043-0.2
Bpl_scaf_62069-0.6SI:DKEY-31G6.6
Bpl_scaf_62084-0.3
Bpl_scaf_62094-0.1TOLL-LIKE RECEPTOR
Bpl_scaf_62094-0.3TOLL-LIKE RECEPTOR
Bpl_scaf_62102-0.10RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_62117-0.2SERINE PROTEASE INHIBITOR, SERPIN
Bpl_scaf_62126-0.0
Bpl_scaf_62148-0.11PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Bpl_scaf_62148-0.14
Bpl_scaf_62148-0.17
Bpl_scaf_62148-0.2
Bpl_scaf_62148-0.8APPLE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_62160-0.4
Bpl_scaf_62175-0.6BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE
Bpl_scaf_62175-0.7
Bpl_scaf_62185-0.5
Bpl_scaf_62190-0.3
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