About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_629-0.0CARBOHYDRATE BINDING DOMAIN CONTAINING PROTEIN
Bpl_scaf_62900-0.0
Bpl_scaf_62900-0.2
Bpl_scaf_62900-1.1
Bpl_scaf_62902-0.1NOTCH LIGAND FAMILY MEMBER
Bpl_scaf_62910-0.1
Bpl_scaf_62910-1.1
Bpl_scaf_62910-1.16
Bpl_scaf_62910-1.2
Bpl_scaf_62910-1.21SOLUTE CARRIER FAMILY 2
Bpl_scaf_62910-1.22
Bpl_scaf_62910-1.3
Bpl_scaf_62910-1.32ATP-DEPENDENT DNA HELICASE
Bpl_scaf_62910-1.35GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE
Bpl_scaf_62910-1.36GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE
Bpl_scaf_62913-0.0
Bpl_scaf_62915-0.0OS10G0105400 PROTEIN
Bpl_scaf_62918-0.1
Bpl_scaf_62919-0.12
Bpl_scaf_62919-0.14PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_62919-0.3CHITIN-BINDING TYPE-4 DOMAIN-CONTAINING PROTEIN
Bpl_scaf_62919-0.8
Bpl_scaf_62919-1.8ZINC FINGER PROTEIN
Bpl_scaf_62926-0.12
Bpl_scaf_62926-0.19
Bpl_scaf_62926-0.20
Bpl_scaf_62926-0.21
Bpl_scaf_62926-0.22
Bpl_scaf_62926-0.23
Bpl_scaf_62926-0.7
Bpl_scaf_62926-1.17
Bpl_scaf_62926-1.18
Bpl_scaf_62930-0.0
Bpl_scaf_62933-0.0RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Bpl_scaf_62937-1.5
Bpl_scaf_62946-0.4OS10G0105400 PROTEIN
Bpl_scaf_62946-1.14
Bpl_scaf_62946-1.16
Bpl_scaf_62946-1.18OS10G0105400 PROTEIN
Bpl_scaf_62946-1.19
Bpl_scaf_62946-1.20
Bpl_scaf_62946-1.21OS10G0105400 PROTEIN
Bpl_scaf_62946-1.22
Bpl_scaf_62954-1.1
Bpl_scaf_62954-1.5
Bpl_scaf_62955-0.2NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN-RELATED
Bpl_scaf_62955-1.8ADENYLATE CYCLASE TYPE 1
Bpl_scaf_62955-2.10
Bpl_scaf_62955-2.6MANNOSE-6-PHOSPHATE RECEPTOR FAMILY MEMBER
Bpl_scaf_62955-2.7
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