About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_62955-2.8
Bpl_scaf_62966-1.2
Bpl_scaf_62966-1.5BONUS, ISOFORM C-RELATED
Bpl_scaf_62966-2.2BONUS, ISOFORM C-RELATED
Bpl_scaf_62967-0.1
Bpl_scaf_62970-0.1PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Bpl_scaf_62970-1.4SOLUTE CARRIER FAMILY 17
Bpl_scaf_62970-1.5PSEUDOURIDYLATE SYNTHASE
Bpl_scaf_62970-2.11DEATH DOMAIN-CONTAINING PROTEIN CRADD
Bpl_scaf_62970-2.3
Bpl_scaf_62970-2.9
Bpl_scaf_62980-0.0
Bpl_scaf_62986-0.1
Bpl_scaf_62986-0.4
Bpl_scaf_62986-0.5
Bpl_scaf_62986-0.7
Bpl_scaf_62986-0.9
Bpl_scaf_62986-1.0
Bpl_scaf_62986-1.1
Bpl_scaf_62986-1.11
Bpl_scaf_62986-1.2
Bpl_scaf_62988-0.0
Bpl_scaf_6299-0.12APPLE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_6299-0.7TRANSPOSON
Bpl_scaf_6299-0.8
Bpl_scaf_62995-0.12TETRATRICOPEPTIDE REPEAT PROTEIN 22
Bpl_scaf_62995-0.13
Bpl_scaf_62995-0.6TETRATRICOPEPTIDE REPEAT PROTEIN 22
Bpl_scaf_62995-1.10TETRATRICOPEPTIDE REPEAT PROTEIN 22
Bpl_scaf_62995-1.12
Bpl_scaf_62995-1.13TETRATRICOPEPTIDE REPEAT PROTEIN 22
Bpl_scaf_62995-1.15TETRATRICOPEPTIDE REPEAT PROTEIN 22
Bpl_scaf_62995-1.17TETRATRICOPEPTIDE REPEAT PROTEIN 22
Bpl_scaf_62995-1.5TETRATRICOPEPTIDE REPEAT PROTEIN 22
Bpl_scaf_62995-2.0TETRATRICOPEPTIDE REPEAT PROTEIN 22
Bpl_scaf_62995-2.11TETRATRICOPEPTIDE REPEAT PROTEIN 22
Bpl_scaf_62995-2.14URIDINE PHOSPHORYLASE
Bpl_scaf_62995-2.26TETRATRICOPEPTIDE REPEAT PROTEIN 22
Bpl_scaf_62995-2.29PROTEIN SIDEKICK
Bpl_scaf_62997-0.3
Bpl_scaf_630-0.0
Bpl_scaf_63004-0.9
Bpl_scaf_63004-1.0
Bpl_scaf_63004-2.10CALCYPHOSIN
Bpl_scaf_63004-2.17WD40 REPEAT PROTEIN
Bpl_scaf_63004-2.18V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT
Bpl_scaf_63004-2.20
Bpl_scaf_63004-2.23UNCHARACTERIZED
Bpl_scaf_63004-2.37DUF3504 DOMAIN-CONTAINING PROTEIN
Bpl_scaf_63004-2.4
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