About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.

Classification

Animalia (Kingdom); Porifera (Phylum); Demospongiae (Class); Heteroscleromorpha (Subclass); Tetractinellida (Order); Astrophorina (Suborder); Geodiidae (Family); Geodiinae (Subfamily); Geodia (Genus); Geodia barretti (Species)

Original Name

Geodia barretti Bowerbank, 1858

Original Description/Redescription

1. Bowerbank J S. On the Anatomy and Physiology of the Spongiadae[J]. Proceedings of the Royal Society of London, 1856, 8: 573-577. (Bowerbank et al., 1858)
2. Cárdenas P, Rapp H T, Klitgaard A B, et al. Taxonomy, biogeography and DNA barcodes of Geodia species (Porifera, Demospongiae, Tetractinellida) in the Atlantic boreo-arctic region[J]. Zoological Journal of the Linnean Society, 2013, 169(2): 251-311. (Cárdenas et al., 2013)

Partial Description

the generally smooth surface (absence of hispidity and epibionts) and white colour. The irregular form, especially in specimens larger than about 15 cm in diameter. The clearly visible sieves in the sometimes numerous preoscular cavities. Spicules: usually dichotriaenes and strongylasters

Distribution/Locality

Geodia barretti has been found at depths from 30 to 2000 m.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50 48.449.319.0531,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

<< First 572 573 574 575 576 577 578 579 580 581 Forward> Last>>        1226 pages in total

Gene IDDescription
CAI8026221.1LD24721P
CAI8026222.1LD24721P
CAI8026223.1CONTACTIN 5
CAI8026224.1NEPHRIN
CAI8026225.1CYTOKINE RECEPTOR
CAI8026226.1CYTOKINE RECEPTOR
CAI8026227.1RAN BINDING PROTEIN
CAI8026228.1RAN BINDING PROTEIN
CAI8026230.1KINESIN-RELATED PROTEIN 6
CAI8026229.1
CAI8026232.1KINESIN-RELATED PROTEIN 6
CAI8026231.1
CAI8026233.1KINESIN-RELATED PROTEIN 6
CAI8026235.1GOLGIN- RELATED
CAI8026234.1GOLGIN- RELATED
CAI8026236.1GOLGIN- RELATED
CAI8026237.1GOLGIN- RELATED
CAI8026238.1GOLGIN- RELATED
CAI8026239.1GOLGIN- RELATED
CAI8026240.1GOLGIN- RELATED
CAI8026241.1GOLGIN- RELATED
CAI8026242.1VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
CAI8026243.1VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
CAI8026244.1
CAI8026245.1FERREDOXIN/ADRENODOXIN
CAI8026250.1SERINE/ARGININE-RICH SPLICING FACTOR
CAI8026248.1
CAI8026247.1SERINE/ARGININE-RICH SPLICING FACTOR
CAI8026249.1SERINE/ARGININE-RICH SPLICING FACTOR
CAI8026246.1SERINE/ARGININE-RICH SPLICING FACTOR
CAI8026251.1SERINE/ARGININE-RICH SPLICING FACTOR
CAI8026252.1
CAI8026256.1X-RAY RADIATION RESISTANCE ASSOCIATED PROTEIN 1 XRRA1
CAI8026253.1X-RAY RADIATION RESISTANCE ASSOCIATED PROTEIN 1 XRRA1
CAI8026257.1X-RAY RADIATION RESISTANCE ASSOCIATED PROTEIN 1 XRRA1
CAI8026254.1X-RAY RADIATION RESISTANCE ASSOCIATED PROTEIN 1 XRRA1
CAI8026258.1X-RAY RADIATION RESISTANCE ASSOCIATED PROTEIN 1 XRRA1
CAI8026255.1X-RAY RADIATION RESISTANCE ASSOCIATED PROTEIN 1 XRRA1
CAI8026261.1BTB/POZ DOMAIN-CONTAINING PROTEIN 19
CAI8026260.1BTB/POZ DOMAIN-CONTAINING PROTEIN 19
CAI8026259.1BTB/POZ DOMAIN-CONTAINING PROTEIN 19
CAI8026262.1BTB/POZ DOMAIN-CONTAINING PROTEIN 19
CAI8026263.1RHO GTPASE-ACTIVATING PROTEIN 100F
CAI8026264.1TYROSINASE FAMILY MEMBER
CAI8026265.1
CAI8026269.1TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE
CAI8026268.1TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE
CAI8026267.1TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE
CAI8026266.1TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE
CAI8026270.1FI04487P
TOP