About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.

Classification

Animalia (Kingdom); Porifera (Phylum); Demospongiae (Class); Heteroscleromorpha (Subclass); Tetractinellida (Order); Astrophorina (Suborder); Geodiidae (Family); Geodiinae (Subfamily); Geodia (Genus); Geodia barretti (Species)

Original Name

Geodia barretti Bowerbank, 1858

Original Description/Redescription

1. Bowerbank J S. On the Anatomy and Physiology of the Spongiadae[J]. Proceedings of the Royal Society of London, 1856, 8: 573-577. (Bowerbank et al., 1858)
2. Cárdenas P, Rapp H T, Klitgaard A B, et al. Taxonomy, biogeography and DNA barcodes of Geodia species (Porifera, Demospongiae, Tetractinellida) in the Atlantic boreo-arctic region[J]. Zoological Journal of the Linnean Society, 2013, 169(2): 251-311. (Cárdenas et al., 2013)

Partial Description

the generally smooth surface (absence of hispidity and epibionts) and white colour. The irregular form, especially in specimens larger than about 15 cm in diameter. The clearly visible sieves in the sometimes numerous preoscular cavities. Spicules: usually dichotriaenes and strongylasters

Distribution/Locality

Geodia barretti has been found at depths from 30 to 2000 m.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50 48.449.319.0531,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

<< First 570 571 572 573 574 575 576 577 578 579 Forward> Last>>        1226 pages in total

Gene IDDescription
CAI8026120.1CHIMERIN FAMILY MEMBER
CAI8026122.1CHIMERIN FAMILY MEMBER
CAI8026124.1CHIMERIN FAMILY MEMBER
CAI8026123.1CHIMERIN FAMILY MEMBER
CAI8026127.1-
CAI8026128.1-
CAI8026129.1-
CAI8026125.1-
CAI8026126.1-
CAI8026130.1U7 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM11
CAI8026132.1SRC-ASSOCIATED ADAPTOR PROTEIN
CAI8026133.1SRC-ASSOCIATED ADAPTOR PROTEIN
CAI8026131.1SRC-ASSOCIATED ADAPTOR PROTEIN
CAI8026135.1SH3 MULTIPLE DOMAIN
CAI8026134.1SH3 MULTIPLE DOMAIN
CAI8026136.1SH3 MULTIPLE DOMAIN
CAI8026138.1SH3 MULTIPLE DOMAIN
CAI8026137.1SH3 MULTIPLE DOMAIN
CAI8026139.1SH3 MULTIPLE DOMAIN
CAI8026140.1
CAI8026144.1FROUNT PROTEIN-RELATED
CAI8026146.1FROUNT PROTEIN-RELATED
CAI8026145.1FROUNT PROTEIN-RELATED
CAI8026143.1FROUNT PROTEIN-RELATED
CAI8026142.1FROUNT PROTEIN-RELATED
CAI8026141.1FROUNT PROTEIN-RELATED
CAI8026147.1FROUNT PROTEIN-RELATED
CAI8026150.1BEIGE/BEACH-RELATED
CAI8026149.1BEIGE/BEACH-RELATED
CAI8026148.1BLUE CHEESE
CAI8026151.1BEIGE/BEACH-RELATED
CAI8026153.1
CAI8026152.1
CAI8026154.1
CAI8026155.1
CAI8026158.1PROLYL ENDOPEPTIDASE
CAI8026157.1PROLYL ENDOPEPTIDASE
CAI8026156.1
CAI8026161.1
CAI8026160.1
CAI8026162.1
CAI8026159.1CYSTEINE PROTEASE FAMILY C1-RELATED
CAI8026163.1PHYTOENE DESATURASE
CAI8026166.1
CAI8026165.1
CAI8026164.1
CAI8026167.1
CAI8026169.1
CAI8026168.1
CAI8026172.1THIAZOLE SYNTHASE
TOP