About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.

Classification

Animalia (Kingdom); Porifera (Phylum); Demospongiae (Class); Heteroscleromorpha (Subclass); Tetractinellida (Order); Astrophorina (Suborder); Geodiidae (Family); Geodiinae (Subfamily); Geodia (Genus); Geodia barretti (Species)

Original Name

Geodia barretti Bowerbank, 1858

Original Description/Redescription

1. Bowerbank J S. On the Anatomy and Physiology of the Spongiadae[J]. Proceedings of the Royal Society of London, 1856, 8: 573-577. (Bowerbank et al., 1858)
2. Cárdenas P, Rapp H T, Klitgaard A B, et al. Taxonomy, biogeography and DNA barcodes of Geodia species (Porifera, Demospongiae, Tetractinellida) in the Atlantic boreo-arctic region[J]. Zoological Journal of the Linnean Society, 2013, 169(2): 251-311. (Cárdenas et al., 2013)

Partial Description

the generally smooth surface (absence of hispidity and epibionts) and white colour. The irregular form, especially in specimens larger than about 15 cm in diameter. The clearly visible sieves in the sometimes numerous preoscular cavities. Spicules: usually dichotriaenes and strongylasters

Distribution/Locality

Geodia barretti has been found at depths from 30 to 2000 m.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50 48.449.319.0531,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8025872.1
CAI8025871.1
CAI8025873.1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
CAI8025874.1
CAI8025875.1
CAI8025877.1
CAI8025876.1
CAI8025880.1SERINE/THREONINE PROTEIN KINASE
CAI8025878.1SERINE/THREONINE PROTEIN KINASE
CAI8025879.1SERINE/THREONINE PROTEIN KINASE
CAI8025881.1SERINE/THREONINE PROTEIN KINASE
CAI8025882.1SERINE/THREONINE PROTEIN KINASE
CAI8025883.1SERINE/THREONINE PROTEIN KINASE
CAI8025884.1
CAI8025886.1PERILIPIN
CAI8025885.1PERILIPIN
CAI8025887.1PERILIPIN
CAI8025888.1
CAI8025889.1PROTEIN SIDEKICK
CAI8025890.1
CAI8025891.1
CAI8025893.1PROTEIN SIDEKICK
CAI8025892.1PROTEIN SIDEKICK
CAI8025894.1
CAI8025895.1
CAI8025899.1PRE-MRNA-PROCESSING FACTOR 17
CAI8025898.1PRE-MRNA-PROCESSING FACTOR 17
CAI8025897.1PRE-MRNA-PROCESSING FACTOR 17
CAI8025896.1PRE-MRNA-PROCESSING FACTOR 17
CAI8025900.1PRE-MRNA-PROCESSING FACTOR 17
CAI8025901.1PRE-MRNA-PROCESSING FACTOR 17
CAI8025902.1
CAI8025903.1IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG
CAI8025905.1EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED
CAI8025904.1EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED
CAI8025906.1EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED
CAI8025907.1OLIGOPHRENIN 1
CAI8025908.1OLIGOPHRENIN 1
CAI8025913.1REGULATOR OF CHROMOSOME CONDENSATION
CAI8025915.1REGULATOR OF CHROMOSOME CONDENSATION
CAI8025914.1REGULATOR OF CHROMOSOME CONDENSATION
CAI8025916.1REGULATOR OF CHROMOSOME CONDENSATION
CAI8025912.1REGULATOR OF CHROMOSOME CONDENSATION
CAI8025911.1
CAI8025910.1
CAI8025917.1CYTOCHROME B5
CAI8025909.1
CAI8025918.1
CAI8025919.1
CAI8025920.1
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