About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.

Classification

Animalia (Kingdom); Porifera (Phylum); Demospongiae (Class); Heteroscleromorpha (Subclass); Tetractinellida (Order); Astrophorina (Suborder); Geodiidae (Family); Geodiinae (Subfamily); Geodia (Genus); Geodia barretti (Species)

Original Name

Geodia barretti Bowerbank, 1858

Original Description/Redescription

1. Bowerbank J S. On the Anatomy and Physiology of the Spongiadae[J]. Proceedings of the Royal Society of London, 1856, 8: 573-577. (Bowerbank et al., 1858)
2. Cárdenas P, Rapp H T, Klitgaard A B, et al. Taxonomy, biogeography and DNA barcodes of Geodia species (Porifera, Demospongiae, Tetractinellida) in the Atlantic boreo-arctic region[J]. Zoological Journal of the Linnean Society, 2013, 169(2): 251-311. (Cárdenas et al., 2013)

Partial Description

the generally smooth surface (absence of hispidity and epibionts) and white colour. The irregular form, especially in specimens larger than about 15 cm in diameter. The clearly visible sieves in the sometimes numerous preoscular cavities. Spicules: usually dichotriaenes and strongylasters

Distribution/Locality

Geodia barretti has been found at depths from 30 to 2000 m.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50 48.449.319.0531,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8025721.160S RIBOSOMAL PROTEIN L11-RELATED
CAI8025722.1SECY/SEC61-ALPHA FAMILY MEMBER
CAI8025723.1SECY/SEC61-ALPHA FAMILY MEMBER
CAI8025725.1RIBOSOMAL PROTEIN L17
CAI8025724.1RIBOSOMAL PROTEIN L17
CAI8025726.1
CAI8025727.1
CAI8025728.1HYDROXYPYRUVATE ISOMERASE
CAI8025729.1
CAI8025730.1ACETATE KINASE
CAI8025731.1PHP DOMAIN PROTEIN
CAI8025732.1ABC TRANSPORTER ATP-BINDING PROTEIN
CAI8025733.1
CAI8025734.1GLUCOSAMINE-6-PHOSPHATE ISOMERASE
CAI8025735.1
CAI8025736.1UNCHARACTERIZED
CAI8025737.1FOUR-JOINTED BOX PROTEIN 1
CAI8025741.1PROTEIN SIDEKICK
CAI8025740.1PROTEIN SIDEKICK
CAI8025739.1PROTEIN SIDEKICK
CAI8025738.1PROTEIN SIDEKICK
CAI8025744.1KELCH DOMAIN-CONTAINING PROTEIN
CAI8025743.1KELCH DOMAIN-CONTAINING PROTEIN
CAI8025742.1KELCH DOMAIN-CONTAINING PROTEIN
CAI8025745.1KELCH REPEAT DOMAIN
CAI8025746.1
CAI8025747.1
CAI8025748.1
CAI8025750.1
CAI8025749.1
CAI8025751.1
CAI8025752.1
CAI8025753.1
CAI8025755.1TRANSMEMBRANE GTPASE FZO1
CAI8025756.1TRANSMEMBRANE GTPASE FZO1
CAI8025754.1
CAI8025757.1TRANSMEMBRANE GTPASE FZO1
CAI8025758.1MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED
CAI8025760.1TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN
CAI8025759.1
CAI8025761.1DUAL SPECIFICITY PROTEIN PHOSPHATASE
CAI8025762.1
CAI8025763.1
CAI8025764.1
CAI8025765.1
CAI8025766.1
CAI8025770.1
CAI8025769.1
CAI8025768.1
CAI8025767.1
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