About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.

Classification

Animalia (Kingdom); Porifera (Phylum); Demospongiae (Class); Heteroscleromorpha (Subclass); Tetractinellida (Order); Astrophorina (Suborder); Geodiidae (Family); Geodiinae (Subfamily); Geodia (Genus); Geodia barretti (Species)

Original Name

Geodia barretti Bowerbank, 1858

Original Description/Redescription

1. Bowerbank J S. On the Anatomy and Physiology of the Spongiadae[J]. Proceedings of the Royal Society of London, 1856, 8: 573-577. (Bowerbank et al., 1858)
2. Cárdenas P, Rapp H T, Klitgaard A B, et al. Taxonomy, biogeography and DNA barcodes of Geodia species (Porifera, Demospongiae, Tetractinellida) in the Atlantic boreo-arctic region[J]. Zoological Journal of the Linnean Society, 2013, 169(2): 251-311. (Cárdenas et al., 2013)

Partial Description

the generally smooth surface (absence of hispidity and epibionts) and white colour. The irregular form, especially in specimens larger than about 15 cm in diameter. The clearly visible sieves in the sometimes numerous preoscular cavities. Spicules: usually dichotriaenes and strongylasters

Distribution/Locality

Geodia barretti has been found at depths from 30 to 2000 m.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50 48.449.319.0531,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8025523.1
CAI8025522.1
CAI8025521.1
CAI8025524.1
CAI8025525.1
CAI8025526.1ESPIN
CAI8025527.1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
CAI8025528.1
CAI8025530.1
CAI8025529.1
CAI8025531.1
CAI8025532.1
CAI8025533.1
CAI8025534.1GLUCOSE INHIBITED DIVISION PROTEIN A
CAI8025535.1GLUCOSE INHIBITED DIVISION PROTEIN A
CAI8025538.1MEMBRALIN/KINETOCHORE PROTEIN NUF2
CAI8025540.1MEMBRALIN/KINETOCHORE PROTEIN NUF2
CAI8025541.1MEMBRALIN/KINETOCHORE PROTEIN NUF2
CAI8025539.1MEMBRALIN/KINETOCHORE PROTEIN NUF2
CAI8025537.1MEMBRALIN/KINETOCHORE PROTEIN NUF2
CAI8025536.1
CAI8025542.1MEMBRALIN/KINETOCHORE PROTEIN NUF2
CAI8025543.1
CAI8025545.1SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED
CAI8025544.1RIBOSOMAL PROTEIN S6 KINASE
CAI8025546.1
CAI8025547.1SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED
CAI8025548.1SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED
CAI8025549.1SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED
CAI8025550.1
CAI8025551.1
CAI8025552.1
CAI8025553.1EUKARYOTIC TRANSLATION ELONGATION FACTOR 1 EPSILON-1
CAI8025554.1
CAI8025555.1
CAI8025556.1
CAI8025557.1ANKYRIN REPEAT PROTEIN
CAI8025558.1ANKYRIN REPEAT PROTEIN
CAI8025559.1
CAI8025560.1DNA2/NAM7 HELICASE FAMILY
CAI8025562.1
CAI8025561.1
CAI8025563.1
CAI8025567.1
CAI8025566.1
CAI8025565.1
CAI8025564.1
CAI8025568.1
CAI8025571.1
CAI8025570.1
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