About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.

Classification

Animalia (Kingdom); Porifera (Phylum); Demospongiae (Class); Heteroscleromorpha (Subclass); Tetractinellida (Order); Astrophorina (Suborder); Geodiidae (Family); Geodiinae (Subfamily); Geodia (Genus); Geodia barretti (Species)

Original Name

Geodia barretti Bowerbank, 1858

Original Description/Redescription

1. Bowerbank J S. On the Anatomy and Physiology of the Spongiadae[J]. Proceedings of the Royal Society of London, 1856, 8: 573-577. (Bowerbank et al., 1858)
2. Cárdenas P, Rapp H T, Klitgaard A B, et al. Taxonomy, biogeography and DNA barcodes of Geodia species (Porifera, Demospongiae, Tetractinellida) in the Atlantic boreo-arctic region[J]. Zoological Journal of the Linnean Society, 2013, 169(2): 251-311. (Cárdenas et al., 2013)

Partial Description

the generally smooth surface (absence of hispidity and epibionts) and white colour. The irregular form, especially in specimens larger than about 15 cm in diameter. The clearly visible sieves in the sometimes numerous preoscular cavities. Spicules: usually dichotriaenes and strongylasters

Distribution/Locality

Geodia barretti has been found at depths from 30 to 2000 m.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50 48.449.319.0531,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

<< First 557 558 559 560 561 562 563 564 565 566 Forward> Last>>        1226 pages in total

Gene IDDescription
CAI8025471.1
CAI8025472.1
CAI8025473.1RADIAL SPOKE HEAD 1 HOMOLOG
CAI8025477.1UROPORPHYRINOGEN III SYNTHASE
CAI8025476.1UROPORPHYRINOGEN III SYNTHASE
CAI8025475.1UROPORPHYRINOGEN III SYNTHASE
CAI8025474.1UROPORPHYRINOGEN III SYNTHASE
CAI8025478.1UROPORPHYRINOGEN III SYNTHASE
CAI8025480.1E3 UBIQUITIN-PROTEIN LIGASE MIB2
CAI8025482.1E3 UBIQUITIN-PROTEIN LIGASE MIB2
CAI8025483.1E3 UBIQUITIN-PROTEIN LIGASE MIB2
CAI8025479.1E3 UBIQUITIN-PROTEIN LIGASE MIB2
CAI8025485.1E3 UBIQUITIN-PROTEIN LIGASE MIB2
CAI8025484.1E3 UBIQUITIN-PROTEIN LIGASE MIB2
CAI8025486.1E3 UBIQUITIN-PROTEIN LIGASE MIB2
CAI8025487.1E3 UBIQUITIN-PROTEIN LIGASE MIB2
CAI8025489.1E3 UBIQUITIN-PROTEIN LIGASE MIB2
CAI8025488.1E3 UBIQUITIN-PROTEIN LIGASE MIB2
CAI8025481.1E3 UBIQUITIN-PROTEIN LIGASE MIB2
CAI8025491.1E3 UBIQUITIN-PROTEIN LIGASE MIB2
CAI8025490.1E3 UBIQUITIN-PROTEIN LIGASE MIB2
CAI8025492.1CASPASE REGULATOR, RING FINGER DOMAIN-CONTAINING
CAI8025493.1CELL DIVISION PROTEIN KINASE
CAI8025494.1CELL DIVISION PROTEIN KINASE
CAI8025495.1SUZ DOMAIN-CONTAINING PROTEIN 1
CAI8025496.1
CAI8025497.1
CAI8025498.1G-PROTEIN COUPLED RECEPTOR FAMILY 1 MEMBER
CAI8025499.1
CAI8025500.1
CAI8025501.1PROSTAGLANDIN REDUCTASE
CAI8025502.1PROSTAGLANDIN REDUCTASE
CAI8025503.1PROSTAGLANDIN REDUCTASE
CAI8025504.1PROSTAGLANDIN REDUCTASE
CAI8025505.1
CAI8025506.1
CAI8025508.1
CAI8025507.1
CAI8025509.1
CAI8025510.1
CAI8025512.1HISTONE ACETYLTRANSFERASE COMPLEX
CAI8025511.1
CAI8025513.1
CAI8025514.1
CAI8025515.1TNF RECEPTOR ASSOCIATED FACTOR
CAI8025516.1
CAI8025517.1
CAI8025518.1
CAI8025519.1
CAI8025520.1
TOP