About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_58176-0.9
Bpl_scaf_58176-1.3
Bpl_scaf_58176-2.6ADENOSINE/GUANOSINE DIPHOSPHATASE
Bpl_scaf_58176-2.7RBP-RELATED
Bpl_scaf_58184-0.0
Bpl_scaf_58186-0.4CEREBELLIN-RELATED
Bpl_scaf_58194-0.5GH10160P
Bpl_scaf_58194-1.12RING FINGER PROTEIN 141-RELATED
Bpl_scaf_58194-1.13LAMIN TAIL DOMAIN-CONTAINING PROTEIN 1
Bpl_scaf_58194-2.18FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_58194-2.19RAS-ASSOCIATING DOMAIN CONTAINING PROTEIN
Bpl_scaf_58194-2.20FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_58194-2.42FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_5820-0.13TRANSLATION INITIATION FACTOR EIF-2B
Bpl_scaf_5820-0.6G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_5820-0.9G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_58203-0.5SRCR DOMAIN-CONTAINING PROTEIN
Bpl_scaf_58204-0.3EXPRESSED PROTEIN
Bpl_scaf_58205-1.5N-ACETYLGALACTOSAMINYLTRANSFERASE
Bpl_scaf_58205-2.21NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_58205-2.22BTB/POZ DOMAIN-CONTAINING PROTEIN 16
Bpl_scaf_58205-2.23ADIPOCYTE-SPECIFIC PROTEIN 4-RELATED
Bpl_scaf_58205-2.45
Bpl_scaf_58205-2.58N-ACETYLGALACTOSAMINYLTRANSFERASE
Bpl_scaf_58205-2.59
Bpl_scaf_58205-2.63
Bpl_scaf_58205-2.64NEUROTRANSMITTER GATED ION CHANNEL
Bpl_scaf_58209-0.1GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED
Bpl_scaf_5821-0.14
Bpl_scaf_5821-0.16
Bpl_scaf_5821-0.17
Bpl_scaf_5821-1.0MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_5821-1.12
Bpl_scaf_5821-1.14
Bpl_scaf_5821-2.15
Bpl_scaf_5821-2.16
Bpl_scaf_5821-2.18
Bpl_scaf_5821-2.21
Bpl_scaf_5821-3.11
Bpl_scaf_5821-3.12
Bpl_scaf_5821-3.2
Bpl_scaf_5821-4.22
Bpl_scaf_5821-4.23
Bpl_scaf_5821-4.26
Bpl_scaf_5821-5.1
Bpl_scaf_5821-5.18
Bpl_scaf_5821-5.19
Bpl_scaf_5821-5.2
Bpl_scaf_5821-5.21
Bpl_scaf_5821-5.24
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