About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_58290-0.10
Bpl_scaf_58290-0.9
Bpl_scaf_58290-3.0
Bpl_scaf_58290-3.17
Bpl_scaf_58290-3.19RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Bpl_scaf_58290-3.8
Bpl_scaf_58291-0.1UNCHARACTERIZED
Bpl_scaf_58294-0.5
Bpl_scaf_58296-0.4TETRATRICOPEPTIDE REPEAT PROTEIN 22
Bpl_scaf_583-0.2
Bpl_scaf_5830-0.872 KDA INOSITOL POLYPHOSPHATE 5-PHOSPHATASE
Bpl_scaf_58300-0.6CADHERIN-23
Bpl_scaf_58301-0.4N-ACETYLGLUCOSAMINYLTRANSFERASE VI
Bpl_scaf_58301-1.1N-ACETYLGLUCOSAMINYLTRANSFERASE VI
Bpl_scaf_58301-1.2N-ACETYLGLUCOSAMINYLTRANSFERASE VI
Bpl_scaf_58301-1.4
Bpl_scaf_58301-3.15
Bpl_scaf_58301-3.3FMRFAMIDE-RELATED PEPTIDES
Bpl_scaf_58301-3.8
Bpl_scaf_58301-3.9WD-40 REPEAT PROTEIN
Bpl_scaf_58302-0.9MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED
Bpl_scaf_58303-0.0
Bpl_scaf_58303-0.1
Bpl_scaf_58307-0.0PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Bpl_scaf_58309-0.1
Bpl_scaf_58309-1.10CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Bpl_scaf_58309-1.11MYOTROPHIN
Bpl_scaf_58309-2.10DYMECLIN
Bpl_scaf_58309-2.11DYMECLIN
Bpl_scaf_58309-3.0
Bpl_scaf_58309-3.13
Bpl_scaf_58319-0.2ELONGATOR COMPLEX PROTEIN 5
Bpl_scaf_58331-0.12
Bpl_scaf_58331-0.3
Bpl_scaf_58331-0.6PROTEIN STAR
Bpl_scaf_58355-0.1PROTEIN FAM45A-RELATED
Bpl_scaf_58379-0.1
Bpl_scaf_58379-0.3
Bpl_scaf_58387-0.6
Bpl_scaf_58388-0.0
Bpl_scaf_58388-1.6CADHERIN-87A
Bpl_scaf_58388-2.13REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_58388-2.17L-ASPARAGINASE
Bpl_scaf_58388-2.18L-ASPARAGINASE
Bpl_scaf_58388-2.3-
Bpl_scaf_58388-2.7APPLE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_58388-3.11L-ASPARAGINASE
Bpl_scaf_58388-3.15TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN
Bpl_scaf_58388-3.16
Bpl_scaf_58388-4.12
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