About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_5865-0.5CHLORIDE INTRACELLULAR CHANNEL, ISOFORM A
Bpl_scaf_5865-0.9ACID PHOSPHATASE-RELATED
Bpl_scaf_58662-0.15RESISTANCE TO INHIBITORS OF CHOLINESTERASE PROTEIN 3 RIC3
Bpl_scaf_58662-0.16NATURAL KILLER CELL-SPECIFIC ANTIGEN KLIP1
Bpl_scaf_58662-0.30UNCHARACTERIZED
Bpl_scaf_58662-0.8-
Bpl_scaf_58678-0.16
Bpl_scaf_58687-0.24G-PROTEIN COUPLED RECEPTOR FAMILY 1 MEMBER
Bpl_scaf_58687-0.30
Bpl_scaf_58687-0.48G-PROTEIN COUPLED RECEPTOR FAMILY 1 MEMBER
Bpl_scaf_58687-0.68G-PROTEIN COUPLED RECEPTOR FAMILY 1 MEMBER
Bpl_scaf_58687-0.69G-PROTEIN COUPLED RECEPTOR FAMILY 1 MEMBER
Bpl_scaf_58687-0.70G-PROTEIN COUPLED RECEPTOR FAMILY 1 MEMBER
Bpl_scaf_58687-0.71G-PROTEIN COUPLED RECEPTOR FAMILY 1 MEMBER
Bpl_scaf_58694-0.18MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_58694-0.19MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_58694-0.20MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_58694-0.21MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_58694-0.22MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_58703-0.24CXC DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_58703-0.25AGAP001331-PA-RELATED
Bpl_scaf_58703-0.28
Bpl_scaf_58703-0.30AGAP001331-PA-RELATED
Bpl_scaf_58703-0.41
Bpl_scaf_58703-0.42
Bpl_scaf_58703-0.43BA1-643
Bpl_scaf_58712-0.15ZINC FINGER AND BTB DOMAIN-CONTAINING
Bpl_scaf_58725-0.6
Bpl_scaf_58725-0.7
Bpl_scaf_58725-0.8
Bpl_scaf_58725-0.9
Bpl_scaf_58733-0.11PLAKOPHILLIN-RELATED
Bpl_scaf_58733-0.12
Bpl_scaf_58733-0.14BONUS, ISOFORM C-RELATED
Bpl_scaf_58733-0.8
Bpl_scaf_58734-0.1-
Bpl_scaf_58734-0.17CYCLIN D1-BINDING PROTEIN 1
Bpl_scaf_58734-0.18CHARGED MULTIVESICULAR BODY PROTEIN
Bpl_scaf_58734-0.19PROGRAMMED CELL DEATH PROTEIN 5
Bpl_scaf_58734-0.3
Bpl_scaf_58743-0.13GLUCOKINASE REGULATORY PROTEIN
Bpl_scaf_58743-0.14THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED
Bpl_scaf_58743-0.20
Bpl_scaf_58750-0.16DEOXYRIBONUCLEASE TATDN2-RELATED
Bpl_scaf_58750-0.18CYTOCHROME P450 FAMILY 4
Bpl_scaf_58750-0.31ALCOHOL O-ACETYLTRANSFERASE 1-RELATED
Bpl_scaf_58750-0.32MOLTING PROTEIN MLT-4
Bpl_scaf_58766-0.10TRANSPOSON
Bpl_scaf_58766-0.15
Bpl_scaf_58766-0.17D-DOPACHROME DECARBOXYLASE
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