About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_58896-6.4IP01015P-RELATED
Bpl_scaf_58896-8.1OLIGORIBONUCLEASE, MITOCHONDRIAL
Bpl_scaf_58896-9.10TRANSCRIPTION FACTOR CASTOR PROTEIN MING -RELATED
Bpl_scaf_58896-9.6LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED
Bpl_scaf_5890-0.7INTERFERON-INDUCIBLE GTPASE
Bpl_scaf_58900-0.3
Bpl_scaf_58904-0.0ADIPOR/PROGESTIN RECEPTOR-RELATED
Bpl_scaf_58904-1.11CATION EFFLUX PROTEIN/ ZINC TRANSPORTER
Bpl_scaf_58904-1.12CONDENSIN-2 COMPLEX SUBUNIT G2
Bpl_scaf_58904-1.14UNCHARACTERIZED
Bpl_scaf_58904-2.126 PROTEASOME COMPLEX SUBUNIT DSS1
Bpl_scaf_58904-2.19LEUCINE RICH REPEAT PROTEIN
Bpl_scaf_58904-2.2DED DOMAIN-CONTAINING PROTEIN
Bpl_scaf_58904-2.32
Bpl_scaf_58904-2.36
Bpl_scaf_58904-2.37ATP-BINDING CASSETTE SUB-FAMILY C
Bpl_scaf_58906-0.0
Bpl_scaf_58909-0.0
Bpl_scaf_58910-0.1NEUROPEPTIDE S RECEPTOR
Bpl_scaf_58910-2.11METALLOPHOSPHOESTERASE
Bpl_scaf_58910-3.13METALLOPHOSPHOESTERASE
Bpl_scaf_58910-3.15
Bpl_scaf_58910-3.17
Bpl_scaf_58910-3.6
Bpl_scaf_58910-3.9
Bpl_scaf_58948-0.1
Bpl_scaf_58948-1.5ANOCTAMIN
Bpl_scaf_58948-1.6FMRFAMIDE RECEPTOR-RELATED
Bpl_scaf_58949-0.0TRANSCRIPTION ELONGATION REGULATOR 1
Bpl_scaf_58950-0.6ALPHA-MANNOSIDASE 2C1
Bpl_scaf_58950-0.8ALPHA-MANNOSIDASE 2C1
Bpl_scaf_58950-1.2INHIBITOR OF APOPTOSIS
Bpl_scaf_58950-1.6
Bpl_scaf_58950-2.1
Bpl_scaf_58950-3.0
Bpl_scaf_58950-4.0
Bpl_scaf_58950-4.1
Bpl_scaf_58950-4.8
Bpl_scaf_58950-5.11
Bpl_scaf_58951-0.8CORTACTIN AND DREBRIN
Bpl_scaf_58951-0.9CYTOKINESIS PROTEIN 3
Bpl_scaf_58952-0.5
Bpl_scaf_58952-0.9PROGRAMMED CELL DEATH PROTEIN 11 PRE-RRNA PROCESSING PROTEIN RRP5
Bpl_scaf_58953-0.4GUANYLYL CYCLASE
Bpl_scaf_58954-1.14PUTATIVE-RELATED
Bpl_scaf_58954-1.15TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
Bpl_scaf_58954-2.7
Bpl_scaf_58956-0.4
Bpl_scaf_58957-0.3
Bpl_scaf_58962-0.1SOLUTE CARRIER FAMILY 22 MEMBER
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