About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_55853-4.25
Bpl_scaf_55853-4.4
Bpl_scaf_55853-4.7
Bpl_scaf_55859-0.0
Bpl_scaf_55873-0.3HOMEOBOX PROTEIN HOX
Bpl_scaf_5588-0.2
Bpl_scaf_5588-0.4UNCHARACTERIZED
Bpl_scaf_55882-0.2BONUS, ISOFORM C-RELATED
Bpl_scaf_55882-0.4
Bpl_scaf_55890-0.10NG37
Bpl_scaf_55891-0.11
Bpl_scaf_55891-0.12
Bpl_scaf_55891-1.4VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Bpl_scaf_55891-1.5APOLIPOPROTEIN D
Bpl_scaf_55891-1.7VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Bpl_scaf_55891-2.0APOLIPOPROTEIN D
Bpl_scaf_55891-2.1APOLIPOPROTEIN D
Bpl_scaf_55891-2.3PERIOSTIN-RELATED
Bpl_scaf_55891-3.12TWISTER
Bpl_scaf_55891-3.14PERIOSTIN-RELATED
Bpl_scaf_55891-3.3HEAT SHOCK PROTEIN 70KDA
Bpl_scaf_55891-3.39PERIOSTIN-RELATED
Bpl_scaf_55891-5.4
Bpl_scaf_55891-5.5SI:DKEY-19B23.12-RELATED
Bpl_scaf_55897-0.5
Bpl_scaf_55910-0.5
Bpl_scaf_55917-0.11SI:CH211-108C17.2-RELATED-RELATED
Bpl_scaf_55924-0.10
Bpl_scaf_55924-0.6FMRFAMIDE RECEPTOR-RELATED
Bpl_scaf_55943-0.11
Bpl_scaf_55943-0.15
Bpl_scaf_55943-0.16
Bpl_scaf_55943-0.25
Bpl_scaf_55952-0.12
Bpl_scaf_55952-0.14
Bpl_scaf_55964-0.2BONUS, ISOFORM C-RELATED
Bpl_scaf_55964-0.8PLASMINOGEN-RELATED
Bpl_scaf_55972-0.4
Bpl_scaf_55988-0.0
Bpl_scaf_56-0.2PARANEOPLASTIC ANTIGEN
Bpl_scaf_5600-0.0ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_5600-0.2ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_56010-0.0
Bpl_scaf_56018-0.8BROMODOMAIN-CONTAINING PROTEIN 8
Bpl_scaf_56018-0.9
Bpl_scaf_56025-0.14DRAB11-RELATED
Bpl_scaf_56025-0.15E3 UBIQUITIN-PROTEIN LIGASE RNF180
Bpl_scaf_56025-0.28FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_56025-0.8SRCR DOMAIN-CONTAINING PROTEIN
Bpl_scaf_56031-0.0
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