About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_55520-0.0
Bpl_scaf_55520-0.12
Bpl_scaf_55520-0.4
Bpl_scaf_55535-0.0
Bpl_scaf_55535-0.9POTE ANKYRIN DOMAIN
Bpl_scaf_55542-0.12AGAP008170-PA
Bpl_scaf_55542-0.14THROMBOSPONDIN
Bpl_scaf_55542-0.3
Bpl_scaf_55542-1.10ZINC FINGER PROTEIN
Bpl_scaf_55542-1.3SH3 DOMAIN-CONTAINING
Bpl_scaf_5555-0.13MESENCHYME-SPECIFIC CELL SURFACE GLYCOPROTEIN
Bpl_scaf_5555-0.14CARBOHYDRATE SULFOTRANSFERASE
Bpl_scaf_5555-0.6
Bpl_scaf_5555-1.10SMALL SEVEN TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_5555-1.11PROTEIN FLATTOP
Bpl_scaf_5555-1.6RETINOBLASTOMA-BINDING PROTEIN 5
Bpl_scaf_5555-2.13DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2
Bpl_scaf_5555-2.15TRIACYLGLYCEROL LIPASE
Bpl_scaf_5555-2.16WD REPEAT DOMAIN-CONTAINING FAMILY
Bpl_scaf_5555-2.17C-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 180
Bpl_scaf_5555-2.26MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_5555-3.12CARBOHYDRATE SULFOTRANSFERASE
Bpl_scaf_5555-3.5GABA-B RECEPTOR
Bpl_scaf_5555-3.8EG:80H7.2 PROTEIN
Bpl_scaf_55561-0.0
Bpl_scaf_55561-1.10
Bpl_scaf_55561-1.14
Bpl_scaf_55561-1.15ANNEXIN
Bpl_scaf_55561-1.17ANNEXIN
Bpl_scaf_55561-1.19
Bpl_scaf_55565-0.4FATTY ACID SYNTHASE
Bpl_scaf_55567-0.1MOTOR NEURON AND PANCREAS HOMEOBOX PROTEIN
Bpl_scaf_55567-1.1326S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 9
Bpl_scaf_55568-0.7
Bpl_scaf_55568-0.8AP COMPLEX SUBUNIT MU
Bpl_scaf_55568-1.11
Bpl_scaf_55568-1.61-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED
Bpl_scaf_55568-2.12
Bpl_scaf_55568-2.16
Bpl_scaf_55568-2.18AAA-FAMILY ATPASE
Bpl_scaf_55568-2.20
Bpl_scaf_55568-2.27
Bpl_scaf_55568-3.5
Bpl_scaf_55568-3.6ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_55568-4.2UNCHARACTERIZED
Bpl_scaf_55568-4.5
Bpl_scaf_55568-4.7UNCHARACTERIZED
Bpl_scaf_55568-4.9DNA-DIRECTED RNA POLYMERASE
Bpl_scaf_55568-5.15NF-KAPPA-B INHIBITOR ALPHA
Bpl_scaf_55568-5.3
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