About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_55568-5.6FORKHEAD BOX PROTEIN N3-LIKE PROTEIN-RELATED
Bpl_scaf_55568-6.10TPR REPEAT CONTAINING PROTEIN
Bpl_scaf_55568-6.11
Bpl_scaf_55568-6.12TPR REPEAT CONTAINING PROTEIN
Bpl_scaf_55568-6.5ALPHA-AMYLASE FAMILY MEMBER
Bpl_scaf_55568-7.18
Bpl_scaf_55568-7.3MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 29
Bpl_scaf_55568-7.7RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG
Bpl_scaf_55568-7.8ALKYLATED DNA REPAIR PROTEIN ALKB-RELATED
Bpl_scaf_55568-8.1MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25
Bpl_scaf_55568-8.13SUCCINATE DEHYDROGENASE ASSEMBLY FACTOR 1, MITOCHONDRIAL
Bpl_scaf_55568-8.4UNCHARACTERIZED
Bpl_scaf_55568-8.9STRIATED MUSCLE ACTIVATOR OF RHO-DEPENDENT SIGNALING-RELATED
Bpl_scaf_55569-0.0PUTATIVE-RELATED
Bpl_scaf_55577-0.1
Bpl_scaf_55577-1.13PHOSPHORYLASE B KINASE REGULATORY SUBUNIT
Bpl_scaf_55577-1.17CYCLINS
Bpl_scaf_55577-1.18
Bpl_scaf_55577-1.20
Bpl_scaf_55589-0.0
Bpl_scaf_55593-0.1
Bpl_scaf_55593-0.14
Bpl_scaf_55593-0.16CEREBELLIN-RELATED
Bpl_scaf_55593-0.19
Bpl_scaf_55593-0.4
Bpl_scaf_55593-1.17
Bpl_scaf_55593-1.18ZINC FINGER PROTEIN ZPR1
Bpl_scaf_55593-1.22
Bpl_scaf_55593-1.23
Bpl_scaf_55593-1.24METALLOPEPTIDASE M28 FAMILY MEMBER
Bpl_scaf_55593-1.25
Bpl_scaf_55598-0.13ACTIVATING TRANSCRIPTION FACTOR ATF 4/5
Bpl_scaf_55598-0.14ALCOHOL DEHYDROGENASE
Bpl_scaf_55598-0.8
Bpl_scaf_55598-1.11LOC100145250 PROTEIN
Bpl_scaf_55598-1.2BONUS, ISOFORM C-RELATED
Bpl_scaf_55598-1.5BETA TRANSDUCIN-RELATED PROTEIN
Bpl_scaf_55599-0.0
Bpl_scaf_55603-0.4SIMILAR TO HYPOTHETICAL PROTEIN FLJ40298
Bpl_scaf_55606-0.0N-LYSINE METHYLTRANSFERASE KMT5A
Bpl_scaf_55607-0.0
Bpl_scaf_55608-0.10
Bpl_scaf_55608-0.12ZGC:195170
Bpl_scaf_55608-1.2
Bpl_scaf_55608-1.29
Bpl_scaf_55608-1.31
Bpl_scaf_55609-0.6CYTOCHROME P450 FAMILY 7
Bpl_scaf_55609-0.8CYTOCHROME P450 FAMILY 7
Bpl_scaf_55609-1.2
Bpl_scaf_55609-1.6TUBULIN POLYGLUTAMYLASE
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