About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_55633-8.4PROTEIN CBG04600
Bpl_scaf_55633-9.5PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED
Bpl_scaf_55634-0.5
Bpl_scaf_55634-1.0
Bpl_scaf_55634-1.15D-RIBITOL-5-PHOSPHATE CYTIDYLYLTRANSFERASE
Bpl_scaf_55634-1.8
Bpl_scaf_55634-10.10REGULATOR OF G PROTEIN SIGNALING
Bpl_scaf_55634-10.6REGULATOR OF G PROTEIN SIGNALING
Bpl_scaf_55634-3.6GABA-B RECEPTOR
Bpl_scaf_55634-4.2THAP DOMAIN-CONTAINING
Bpl_scaf_55634-4.8SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED
Bpl_scaf_55634-5.1
Bpl_scaf_55634-6.4SOLUTE CARRIER FAMILY 5
Bpl_scaf_55634-7.11APOLIPOPROTEIN D
Bpl_scaf_55634-7.12RETINOL-BINDING PROTEIN 4
Bpl_scaf_55634-8.7REGULATOR OF G PROTEIN SIGNALING
Bpl_scaf_55634-8.9
Bpl_scaf_55637-0.1
Bpl_scaf_55638-0.0AGAP001331-PA-RELATED
Bpl_scaf_55645-2.0
Bpl_scaf_55671-0.3POLY ADP-RIBOSE POLYMERASE FAMILY, MEMBER PARP
Bpl_scaf_55671-0.5
Bpl_scaf_55673-0.10
Bpl_scaf_55673-0.12NUCLEAR CAP-BINDING PROTEIN SUBUNIT 3
Bpl_scaf_55673-0.13
Bpl_scaf_55673-0.16
Bpl_scaf_55673-0.3
Bpl_scaf_55674-0.1E3 UBIQUITIN-PROTEIN LIGASE KCMF1
Bpl_scaf_55675-0.1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Bpl_scaf_55675-0.2GLYCOSYLTRANSFERASE 14 FAMILY MEMBER
Bpl_scaf_55675-1.5TOLL-LIKE RECEPTOR
Bpl_scaf_55675-3.3
Bpl_scaf_55675-3.5
Bpl_scaf_55675-3.7SIDESTEP PROTEIN
Bpl_scaf_55675-4.14
Bpl_scaf_55675-4.15KUNITZ-TYPE PROTEASE INHIBITOR-RELATED
Bpl_scaf_55675-4.9
Bpl_scaf_55675-5.0
Bpl_scaf_55675-5.5EPPIN
Bpl_scaf_55675-6.11CARNITINE O-ACYLTRANSFERASE
Bpl_scaf_55675-6.12ZINC FINGER PROTEIN
Bpl_scaf_55675-6.13ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED
Bpl_scaf_55675-6.38TUBULIN
Bpl_scaf_55684-0.2UNCHARACTERIZED
Bpl_scaf_55684-1.11
Bpl_scaf_55684-1.6SEC63 DOMAIN-CONTAINING
Bpl_scaf_55684-1.8COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED
Bpl_scaf_55684-2.6NUCLEOREDOXIN
Bpl_scaf_55684-2.7NUCLEOREDOXIN
Bpl_scaf_55684-3.0E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED
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