About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_55759-3.1
Bpl_scaf_55759-3.11PROTEASOME SUBUNIT ALPHA/BETA
Bpl_scaf_55759-3.15
Bpl_scaf_55759-3.8PROTEIN CBG24663
Bpl_scaf_55759-4.6PROTEIN TORNADO 1
Bpl_scaf_55759-4.7
Bpl_scaf_55765-0.2
Bpl_scaf_55783-0.0
Bpl_scaf_558-1.0
Bpl_scaf_558-1.10PLEKHH PROTEIN
Bpl_scaf_558-1.3
Bpl_scaf_558-1.4
Bpl_scaf_558-1.5
Bpl_scaf_558-1.9PLEKHH PROTEIN
Bpl_scaf_558-2.4THADA/DEATH RECEPTOR INTERACTING PROTEIN
Bpl_scaf_558-3.6CCCH ZINC FINGER/TIS11-RELATED
Bpl_scaf_558-6.6TRANSMEMBRANE CHANNEL-RELATED
Bpl_scaf_558-6.7ATP-DEPENDENT RNA HELICASE DBP3
Bpl_scaf_558-7.5EUKARYOTIC TRANSLATION INITIATION FACTOR 3
Bpl_scaf_558-7.8
Bpl_scaf_558-8.0
Bpl_scaf_558-8.1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_55805-0.1
Bpl_scaf_55808-0.1PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_55814-0.3UBIQUITIN-CONJUGATING ENZYME E2
Bpl_scaf_55830-0.11ENDONUCLEASE-RELATED
Bpl_scaf_55830-0.9CEREBELLIN-RELATED
Bpl_scaf_55831-0.1PROTEIN C6ORF130
Bpl_scaf_55831-1.1PROTEIN C6ORF130
Bpl_scaf_55831-2.2PYRIDINE NUCLEOTIDE-DISULFIDE OXIDOREDUCTASE DOMAIN-CONTAINING
Bpl_scaf_55831-3.4
Bpl_scaf_55831-3.6PROTEIN O-MANNOSYL-TRANSFERASE TMTC2
Bpl_scaf_55831-3.7
Bpl_scaf_55831-4.0
Bpl_scaf_55831-4.10
Bpl_scaf_55831-4.2
Bpl_scaf_55831-4.23CXC DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_55831-4.245'-NUCLEOTIDASE-RELATED
Bpl_scaf_55832-0.0E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED
Bpl_scaf_55843-0.1SI:DKEY-16J16.4
Bpl_scaf_55852-0.1GAMMA-SECRETASE SUBUNIT PEN-2
Bpl_scaf_55853-0.4
Bpl_scaf_55853-0.5PUTATIVE-RELATED
Bpl_scaf_55853-1.0LEUCOKININ RECEPTOR-RELATED
Bpl_scaf_55853-2.0NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_55853-2.5PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Bpl_scaf_55853-3.8
Bpl_scaf_55853-3.9
Bpl_scaf_55853-4.13
Bpl_scaf_55853-4.2
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