About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_024871-T1
LLU|FUN_024872-T1DEAD-BOX ATP-DEPENDENT RNA HELICASE 50
LLU|FUN_024873-T1ACROSIN-RELATED
LLU|FUN_024874-T1
LLU|FUN_024875-T1HEAT SHOCK REGULATED 2
LLU|FUN_024879-T1
LLU|FUN_024880-T1SULFIDE:QUINONE OXIDOREDUCTASE
LLU|FUN_024881-T1
LLU|FUN_024882-T1
LLU|FUN_024883-T1SULFIDE:QUINONE OXIDOREDUCTASE
LLU|FUN_024884-T1SULFIDE:QUINONE OXIDOREDUCTASE
LLU|FUN_024885-T1SULFIDE:QUINONE OXIDOREDUCTASE
LLU|FUN_024886-T1SULFIDE:QUINONE OXIDOREDUCTASE
LLU|FUN_024887-T1SULFIDE:QUINONE OXIDOREDUCTASE
LLU|FUN_024888-T1SULFIDE:QUINONE OXIDOREDUCTASE
LLU|FUN_024889-T1SULFIDE:QUINONE OXIDOREDUCTASE
LLU|FUN_024890-T1NEUROPEPTIDE Y RECEPTOR
LLU|FUN_024891-T1
LLU|FUN_024892-T1
LLU|FUN_024893-T1NUP107-RELATED
LLU|FUN_024894-T1
LLU|FUN_024895-T1USP DOMAIN-CONTAINING PROTEIN
LLU|FUN_024896-T1
LLU|FUN_024897-T1
LLU|FUN_024898-T1
LLU|FUN_024899-T1
LLU|FUN_024900-T1CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 300
LLU|FUN_024901-T1ADHESION G-PROTEIN COUPLED RECEPTOR V1
LLU|FUN_024902-T1
LLU|FUN_024903-T1ADHESION G-PROTEIN COUPLED RECEPTOR V1
LLU|FUN_024904-T1UNCHARACTERIZED
LLU|FUN_024905-T1POTASSIUM CHANNEL, SUBFAMILY K
LLU|FUN_024906-T1
LLU|FUN_024907-T1
LLU|FUN_024908-T1TRANSCRIPTION ELONGATION FACTOR SPT6
LLU|FUN_024909-T1RHO FAMILY GTPASE
LLU|FUN_024910-T1
LLU|FUN_024911-T1
LLU|FUN_024912-T1PROTEIN DOK-7
LLU|FUN_024913-T1
LLU|FUN_024914-T1PROTEIN DOK-7
LLU|FUN_024915-T1CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN
LLU|FUN_024916-T1AP-1 COMPLEX-ASSOCIATED REGULATORY PROTEIN
LLU|FUN_024917-T1MAP/MICROTUBULE AFFINITY-REGULATING KINASE
LLU|FUN_024918-T1
LLU|FUN_024919-T1
LLU|FUN_024920-T1
LLU|FUN_024921-T1
LLU|FUN_024922-T1
LLU|FUN_024923-T1
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