About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_024563-T1HEXAMETHYLENE BISACETAMIDE INDUCIBLE 1
LLU|FUN_024564-T1PCD6 INTERACTING PROTEIN-RELATED
LLU|FUN_024565-T1SORTING NEXIN-4
LLU|FUN_024566-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_024567-T1
LLU|FUN_024568-T1SUPEROXIDE DISMUTASE CU-ZN -RELATED
LLU|FUN_024569-T1SUPEROXIDE DISMUTASE CU-ZN -RELATED
LLU|FUN_024570-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_024571-T1
LLU|FUN_024572-T1MUCIN 4-RELATED
LLU|FUN_024573-T1FIBRILLIN-RELATED
LLU|FUN_024574-T1
LLU|FUN_024575-T1ZINC PHOSPHODIESTERASE ELAC PROTEIN 1
LLU|FUN_024576-T1BETA-MANNOSIDASE
LLU|FUN_024577-T1
LLU|FUN_024578-T1CRUMBS FAMILY MEMBER
LLU|FUN_024579-T1
LLU|FUN_024580-T1
LLU|FUN_024581-T1
LLU|FUN_024582-T1
LLU|FUN_024583-T1-
LLU|FUN_024584-T1
LLU|FUN_024585-T1
LLU|FUN_024586-T1
LLU|FUN_024587-T1
LLU|FUN_024588-T1EGF-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_024589-T1GLYCINE CLEAVAGE SYSTEM H PROTEIN
LLU|FUN_024590-T1
LLU|FUN_024591-T1
LLU|FUN_024592-T14.1 G PROTEIN
LLU|FUN_024593-T1DUF853 DOMAIN-CONTAINING PROTEIN
LLU|FUN_024594-T1
LLU|FUN_024595-T1DYNEIN REGULATORY COMPLEX SUBUNIT 4
LLU|FUN_024596-T1NUDIX HYDROLASE
LLU|FUN_024597-T1SPERMATOGENESIS-ASSOCIATED PROTEIN 2/TAMOZHENNIC
LLU|FUN_024598-T1ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 27
LLU|FUN_024599-T1
LLU|FUN_024600-T1
LLU|FUN_024601-T1ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 27
LLU|FUN_024602-T1
LLU|FUN_024603-T1ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED
LLU|FUN_024604-T1
LLU|FUN_024605-T1
LLU|FUN_024606-T1
LLU|FUN_024607-T1
LLU|FUN_024608-T1
LLU|FUN_024609-T1
LLU|FUN_024610-T1G-PROTEIN COUPLED RECEPTOR 158-RELATED
LLU|FUN_024611-T1
LLU|FUN_024612-T1
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