About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_024413-T1UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIAL
LLU|FUN_024414-T1
LLU|FUN_024415-T1
LLU|FUN_024416-T1
LLU|FUN_024417-T1
LLU|FUN_024418-T1PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
LLU|FUN_024419-T1MACROGLOBULIN / COMPLEMENT
LLU|FUN_024420-T1MACROGLOBULIN / COMPLEMENT
LLU|FUN_024421-T1IONOTROPIC GLUTAMATE RECEPTOR
LLU|FUN_024422-T1
LLU|FUN_024423-T1
LLU|FUN_024424-T1
LLU|FUN_024425-T1
LLU|FUN_024426-T1
LLU|FUN_024427-T1
LLU|FUN_024428-T1IRE1-RELATED
LLU|FUN_024429-T1DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED
LLU|FUN_024430-T1RNA-BINDING PROTEIN
LLU|FUN_024431-T1ANKYRIN REPEAT DOMAIN 40
LLU|FUN_024432-T1
LLU|FUN_024433-T1
LLU|FUN_024434-T1
LLU|FUN_024435-T1
LLU|FUN_024436-T1FTP DOMAIN-CONTAINING PROTEIN
LLU|FUN_024437-T1
LLU|FUN_024438-T1
LLU|FUN_024439-T1MUCIN 4-RELATED
LLU|FUN_024440-T1ALPHA-TECTORIN-RELATED
LLU|FUN_024441-T1
LLU|FUN_024442-T1TUDOR DOMAIN CONTAINING PROTEIN
LLU|FUN_024443-T1
LLU|FUN_024444-T1
LLU|FUN_024445-T1
LLU|FUN_024446-T1EPM2A-INTERACTING PROTEIN 1
LLU|FUN_024447-T1
LLU|FUN_024448-T1
LLU|FUN_024449-T1BASIGIN RELATED
LLU|FUN_024450-T1GLYCINE N-METHYLTRANSFERASE
LLU|FUN_024451-T1PROTEIN DISPATCHED-RELATED
LLU|FUN_024452-T1PLEXIN
LLU|FUN_024453-T1GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE
LLU|FUN_024454-T1
LLU|FUN_024455-T1MULTIPLE PDZ DOMAIN PROTEIN
LLU|FUN_024456-T1SER/THR-PROTEIN KINASE RIO2
LLU|FUN_024457-T1-
LLU|FUN_024458-T1
LLU|FUN_024459-T1
LLU|FUN_024460-T1CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 161
LLU|FUN_024461-T1TRANS-GOLGI PROTEIN GMX33
LLU|FUN_024462-T1ANOCTAMIN
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