About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_024463-T1ANOCTAMIN
LLU|FUN_024464-T1ANOCTAMIN
LLU|FUN_024465-T1
LLU|FUN_024466-T1ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED
LLU|FUN_024467-T1
LLU|FUN_024468-T1HCLS1-ASSOCIATED PROTEIN X-1
LLU|FUN_024469-T1GAMMA TUBULIN COMPLEX PROTEIN
LLU|FUN_024470-T1
LLU|FUN_024471-T1OS10G0105400 PROTEIN
LLU|FUN_024472-T1ATR-INTERACTING PROTEIN
LLU|FUN_024473-T1NADH-UBIQUINONE OXIDOREDUCTASE ESSS SUBUNIT, MITOCHONDRIAL PRECURSOR
LLU|FUN_024474-T1
LLU|FUN_024475-T1SERINE/THREONINE-PROTEIN KINASE
LLU|FUN_024476-T1TRANSFERASE, PUTATIVE-RELATED
LLU|FUN_024477-T1
LLU|FUN_024478-T1
LLU|FUN_024479-T1
LLU|FUN_024480-T1
LLU|FUN_024481-T1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
LLU|FUN_024482-T1CRUMBS FAMILY MEMBER
LLU|FUN_024483-T1NOTCH LIGAND FAMILY MEMBER
LLU|FUN_024484-T1
LLU|FUN_024485-T1SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING
LLU|FUN_024486-T1
LLU|FUN_024487-T1
LLU|FUN_024488-T1
LLU|FUN_024489-T1ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
LLU|FUN_024490-T1ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
LLU|FUN_024491-T1ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
LLU|FUN_024492-T1ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
LLU|FUN_024493-T1ZINC FINGER PROTEIN
LLU|FUN_024494-T1MADF DOMAIN TRANSCRIPTION FACTOR
LLU|FUN_024495-T1
LLU|FUN_024496-T1
LLU|FUN_024497-T1DYNEIN INTERMEDIATE CHAIN
LLU|FUN_024498-T1AP-5 COMPLEX SUBUNIT ZETA-1
LLU|FUN_024499-T1
LLU|FUN_024500-T1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
LLU|FUN_024501-T1TRANSMEMBRANE CHANNEL-RELATED
LLU|FUN_024502-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
LLU|FUN_024503-T1
LLU|FUN_024504-T1
LLU|FUN_024505-T1
LLU|FUN_024506-T1
LLU|FUN_024507-T1
LLU|FUN_024508-T1
LLU|FUN_024509-T1CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
LLU|FUN_024510-T1
LLU|FUN_024511-T1
LLU|FUN_024512-T1
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